Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317479

Identifier: 74317479

GI number: 74317479

Start: 1546092

End: 1546418

Strand: Direct

Name: 74317479

Synonym: Tbd_1461

Alternate gene names: NA

Gene position: 1546092-1546418 (Clockwise)

Preceding gene: 74317478

Following gene: 74317480

Centisome position: 53.13

GC content: 63.61

Gene sequence:

>327_bases
ATGATTGAGCTGGAGCGTCTCGTGCTGCTTCCCGGCGTCGTCGCGGCATTGCGCTTCAACGACGACGGAACACCGGCCGA
AGCGGTCGGCGACCTCGACCAGATCGACGTCGAGCTGGCCGCCGAACTCTGTTACGCCAACGGCCGTTTCATGCATCACA
ACAGCGACATGCTGATGACGTTTTCCGGCAAGGACGGATGGGCGCCGCGCGGCTGGGTCATGAACGGCGAGTTGCTGTCG
GTCTGTGGCGCCGGCGACCTTGCATGCTTCGTTCGCAACGACGAGGCGGCTGTCAACGACCTGCTCCACCTCATCGCCGA
GGTCTAG

Upstream 100 bases:

>100_bases
GGCCAGGCCGTGCTCGCCCATCGTGCGCAATTCGACTATGACCTCGCCTACCGTCGTTTCAACGCAGCGATCGAAGCAAA
TCCCTGAGAGGAGGCCGTCC

Downstream 100 bases:

>100_bases
GCCCCACTCGGCCTGAGCCTCTCTGCTCGCACCGATCCAACGCGCCCTGCGCGCGCCTTCGGATCCGTCGCGTCTTCGCG
CACGGCCGGTCGGCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIELERLVLLPGVVAALRFNDDGTPAEAVGDLDQIDVELAAELCYANGRFMHHNSDMLMTFSGKDGWAPRGWVMNGELLS
VCGAGDLACFVRNDEAAVNDLLHLIAEV

Sequences:

>Translated_108_residues
MIELERLVLLPGVVAALRFNDDGTPAEAVGDLDQIDVELAAELCYANGRFMHHNSDMLMTFSGKDGWAPRGWVMNGELLS
VCGAGDLACFVRNDEAAVNDLLHLIAEV
>Mature_108_residues
MIELERLVLLPGVVAALRFNDDGTPAEAVGDLDQIDVELAAELCYANGRFMHHNSDMLMTFSGKDGWAPRGWVMNGELLS
VCGAGDLACFVRNDEAAVNDLLHLIAEV

Specific function: Unknown

COG id: COG4831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11702; Mature: 11702

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELERLVLLPGVVAALRFNDDGTPAEAVGDLDQIDVELAAELCYANGRFMHHNSDMLMT
CCCCHHHHHCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCEEEE
FSGKDGWAPRGWVMNGELLSVCGAGDLACFVRNDEAAVNDLLHLIAEV
ECCCCCCCCCCEEECCCEEEECCCCCEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIELERLVLLPGVVAALRFNDDGTPAEAVGDLDQIDVELAAELCYANGRFMHHNSDMLMT
CCCCHHHHHCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCEEEE
FSGKDGWAPRGWVMNGELLSVCGAGDLACFVRNDEAAVNDLLHLIAEV
ECCCCCCCCCCEEECCCEEEECCCCCEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA