Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317478

Identifier: 74317478

GI number: 74317478

Start: 1545734

End: 1546078

Strand: Direct

Name: 74317478

Synonym: Tbd_1460

Alternate gene names: NA

Gene position: 1545734-1546078 (Clockwise)

Preceding gene: 74317477

Following gene: 74317479

Centisome position: 53.12

GC content: 64.35

Gene sequence:

>345_bases
ATGCCGGTGCTGCAAGAACTCATGGATTTACCGGGCGTCTACGGCGCGATCGAATTCTCGTGCACGGGCGAACTGGGTGA
AACCCGGGGCGAGATCGAGCCCGACTTCGCCCGCATCCTCGCGCAGATGTGCGCCGCGAACATGGCGATCTACCGGATGC
AGGCGACCGGCTGGACGCAGCTGACCGGCCAGGGCGGCTTCCTCCCCGAACGCGGCTTCGCCTTGATGACGCTCGACCAC
GTGCTCATGGGCAGGGACGGCCAGGCCGTGCTCGCCCATCGTGCGCAATTCGACTATGACCTCGCCTACCGTCGTTTCAA
CGCAGCGATCGAAGCAAATCCCTGA

Upstream 100 bases:

>100_bases
CATCGCACGCGCCGCCGAGGTGCCGTTCAAGCGTCTGATCGATGCCATGGAATCCCTGGCGGCCGAGCAGATCATCCAGC
CCTCACTCTAGGAGACACTC

Downstream 100 bases:

>100_bases
GAGGAGGCCGTCCATGATTGAGCTGGAGCGTCTCGTGCTGCTTCCCGGCGTCGTCGCGGCATTGCGCTTCAACGACGACG
GAACACCGGCCGAAGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPVLQELMDLPGVYGAIEFSCTGELGETRGEIEPDFARILAQMCAANMAIYRMQATGWTQLTGQGGFLPERGFALMTLDH
VLMGRDGQAVLAHRAQFDYDLAYRRFNAAIEANP

Sequences:

>Translated_114_residues
MPVLQELMDLPGVYGAIEFSCTGELGETRGEIEPDFARILAQMCAANMAIYRMQATGWTQLTGQGGFLPERGFALMTLDH
VLMGRDGQAVLAHRAQFDYDLAYRRFNAAIEANP
>Mature_113_residues
PVLQELMDLPGVYGAIEFSCTGELGETRGEIEPDFARILAQMCAANMAIYRMQATGWTQLTGQGGFLPERGFALMTLDHV
LMGRDGQAVLAHRAQFDYDLAYRRFNAAIEANP

Specific function: Unknown

COG id: COG4831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12602; Mature: 12470

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLQELMDLPGVYGAIEFSCTGELGETRGEIEPDFARILAQMCAANMAIYRMQATGWTQ
CCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCEE
LTGQGGFLPERGFALMTLDHVLMGRDGQAVLAHRAQFDYDLAYRRFNAAIEANP
ECCCCCCCCCCCEEHEEHHHHHHCCCCCEEEHHHCCCCHHHHHHHHCCEEECCC
>Mature Secondary Structure 
PVLQELMDLPGVYGAIEFSCTGELGETRGEIEPDFARILAQMCAANMAIYRMQATGWTQ
CHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCEE
LTGQGGFLPERGFALMTLDHVLMGRDGQAVLAHRAQFDYDLAYRRFNAAIEANP
ECCCCCCCCCCCEEHEEHHHHHHCCCCCEEEHHHCCCCHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA