| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317471
Identifier: 74317471
GI number: 74317471
Start: 1536238
End: 1537710
Strand: Direct
Name: 74317471
Synonym: Tbd_1453
Alternate gene names: NA
Gene position: 1536238-1537710 (Clockwise)
Preceding gene: 74317470
Following gene: 74317472
Centisome position: 52.8
GC content: 67.55
Gene sequence:
>1473_bases GTGCGCGTCCTCATCGTCGTCGACGACCCGCCCGACTGGCCCCTCGACATCCCCGGCATCGGGGTCGTCGCGGCCGAGGC CTATCTGACCGACCCGACCTACGGCGACGACCGCTCGGTCAAGGTCTTCAACCTCTGCCGCTCCTACCGCTACCAGAGCA CGGGCTACTACGTCTCGCTGCTCGCCGAAGCGCGCGGGCACCGCCCGCTGCCCCGGGTCGGCACGATCGAGGACCTCGCC TCGCCGAAGCTGTTGCCGCTCCTGGTCGGCGACCTCGACGCGCTGGTGCAGACCGCGCTGGCCCCGATCAAGTCGCAGAG CTTCGAGCTCAGCATCTATTTCGGCCGCAACGTCGCGAGCCGTTACGACGCCTTGAGCCAGCAGCTGTTCGCCCGCCTGC AGGCACCGCTGCTGCGTGCATATTTCGAGCGCCGCAACGGCGACTGGCGGCTCGCGGAGGTGCAGGCCATCGCGGCGAGC GAAATCCCGGTCCCGCACCGCGAGTTCGTCGTCGAGGCGGCGACGGCCCATTTCACCGGCCATCGCCGCATCACGCGCAA GCGCGCGGCGCCGCGCTTCAATCTCGCGATCCTGCACGACCCGGCCAATCCCGAGCCGCCGTCCAACGCGCGGGCGATGC GCCGCTTCGAGAAGGCTGCCGAAGAGCTAGGCCTCCAGGTCGCCTTGATCACACGCAACGACCTCGAGCGCCTGCCCCGC TTCGACGCCCTCTTCATCCGCGACACGACCTATCCCAACCATTACACCTACAGCTTTTCGCGTCGGGCCGCCGCCGAGGG CCTGGTCGTGATCGACGACCCCGACTCGATCCTCAAATGCAACAACAAGGTCTATCTCGCCGAACTGCACGTCCGCCACC ACATTCCCGCGCCGCGAACGCTGGTCGTGCACCAGGGCAACATCGGCGCGATCGTCGCGACTCTCGGGCTGCCGTGCGTG CTCAAGCAGCCCGACAGTTCCGGATCGCTCGGCGTCGACCGGGTCGACACCGAGCCCGAGCTGCTCGCCAAGGTGAGGAC AATGCTGCGCAAGTCCGAACTCGTCGTCGCCCAGGAATGGCTGCCGACGGCCTTCGACTGGCGGATCGGCGTCCTCGACC ACCGCCCGCTCTACGTCTGCAAATACTTCATGGCGCCCGGCCACTGGCAGATCGTCAAGCGCGAGCCCGGCCGCAAGGGC TACCAGGAAGGCCGCGTCAAGGCGGTCGCGGTCGCCGAGGTGCCGGAGGAAGTGATCAAGATCGCGCTGCAGACGGCCGA CCTCATCGGGGACGGGCTCTACGGCGTCGACGTCAAGGTCGTCGGCAATCGCTGCTACGTCATCGAGGTCAACGACAACC CCAACATCGACGCCGGCAACGAAGACGGCGTGCTGAAGGACGCGCTCTACCGCGAAATCATGGGCTCCTTCGTGCGTCGC CTCGAGGCCCGCAAGCTGGGTCATCCCCAATGA
Upstream 100 bases:
>100_bases GCATCGACCGCGTCATCGGCGCGGTGCTGCTCGGCATCGTCACCCACGATGCCAACCTGCTGTTCATCTATCCGCCGCGC GCGTTGCCGCGGGCCTGAAC
Downstream 100 bases:
>100_bases ATCCGCCTGCGCTCGACGCCTTTGCGGGTTACGGCGTCGAGCTCGAATACATGGTCGTCGCGCGCGACACGCTCGCCGTG CTGCCGATCGCCGACCGTCT
Product: glutathione synthase/ribosomal protein S6 modification protein
Products: NA
Alternate protein names: Glutathione Synthase/Ribosomal; RimK Domain Protein ATP-Grasp; Glutathione Synthase; Ribosomal Protein-Related Protein; RimK-Like ATP-Grasp Domain Family; Alpha-L-Glutamate Ligase Family Protein; RimK-Like ATP-Grasp; 30S Ribosomal Protein-Related Protein; GCN5-Related N-Acetyltransferase; Ribosomal Protein; Fused RimK-Like Domain/ Domain-Containing Protein; RimK Domain-Containing Protein; 30S Ribosomal Protein; Ribosomal Protein-Like Protein; Rimk Domain Protein ATP-Grasp; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Ribosomal -Glutamic Acid Ligase
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MRVLIVVDDPPDWPLDIPGIGVVAAEAYLTDPTYGDDRSVKVFNLCRSYRYQSTGYYVSLLAEARGHRPLPRVGTIEDLA SPKLLPLLVGDLDALVQTALAPIKSQSFELSIYFGRNVASRYDALSQQLFARLQAPLLRAYFERRNGDWRLAEVQAIAAS EIPVPHREFVVEAATAHFTGHRRITRKRAAPRFNLAILHDPANPEPPSNARAMRRFEKAAEELGLQVALITRNDLERLPR FDALFIRDTTYPNHYTYSFSRRAAAEGLVVIDDPDSILKCNNKVYLAELHVRHHIPAPRTLVVHQGNIGAIVATLGLPCV LKQPDSSGSLGVDRVDTEPELLAKVRTMLRKSELVVAQEWLPTAFDWRIGVLDHRPLYVCKYFMAPGHWQIVKREPGRKG YQEGRVKAVAVAEVPEEVIKIALQTADLIGDGLYGVDVKVVGNRCYVIEVNDNPNIDAGNEDGVLKDALYREIMGSFVRR LEARKLGHPQ
Sequences:
>Translated_490_residues MRVLIVVDDPPDWPLDIPGIGVVAAEAYLTDPTYGDDRSVKVFNLCRSYRYQSTGYYVSLLAEARGHRPLPRVGTIEDLA SPKLLPLLVGDLDALVQTALAPIKSQSFELSIYFGRNVASRYDALSQQLFARLQAPLLRAYFERRNGDWRLAEVQAIAAS EIPVPHREFVVEAATAHFTGHRRITRKRAAPRFNLAILHDPANPEPPSNARAMRRFEKAAEELGLQVALITRNDLERLPR FDALFIRDTTYPNHYTYSFSRRAAAEGLVVIDDPDSILKCNNKVYLAELHVRHHIPAPRTLVVHQGNIGAIVATLGLPCV LKQPDSSGSLGVDRVDTEPELLAKVRTMLRKSELVVAQEWLPTAFDWRIGVLDHRPLYVCKYFMAPGHWQIVKREPGRKG YQEGRVKAVAVAEVPEEVIKIALQTADLIGDGLYGVDVKVVGNRCYVIEVNDNPNIDAGNEDGVLKDALYREIMGSFVRR LEARKLGHPQ >Mature_490_residues MRVLIVVDDPPDWPLDIPGIGVVAAEAYLTDPTYGDDRSVKVFNLCRSYRYQSTGYYVSLLAEARGHRPLPRVGTIEDLA SPKLLPLLVGDLDALVQTALAPIKSQSFELSIYFGRNVASRYDALSQQLFARLQAPLLRAYFERRNGDWRLAEVQAIAAS EIPVPHREFVVEAATAHFTGHRRITRKRAAPRFNLAILHDPANPEPPSNARAMRRFEKAAEELGLQVALITRNDLERLPR FDALFIRDTTYPNHYTYSFSRRAAAEGLVVIDDPDSILKCNNKVYLAELHVRHHIPAPRTLVVHQGNIGAIVATLGLPCV LKQPDSSGSLGVDRVDTEPELLAKVRTMLRKSELVVAQEWLPTAFDWRIGVLDHRPLYVCKYFMAPGHWQIVKREPGRKG YQEGRVKAVAVAEVPEEVIKIALQTADLIGDGLYGVDVKVVGNRCYVIEVNDNPNIDAGNEDGVLKDALYREIMGSFVRR LEARKLGHPQ
Specific function: Unknown
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54870; Mature: 54870
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLIVVDDPPDWPLDIPGIGVVAAEAYLTDPTYGDDRSVKVFNLCRSYRYQSTGYYVSL CEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEE LAEARGHRPLPRVGTIEDLASPKLLPLLVGDLDALVQTALAPIKSQSFELSIYFGRNVAS EEHHCCCCCCCCCCCHHHHCCCCEEHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHH RYDALSQQLFARLQAPLLRAYFERRNGDWRLAEVQAIAASEIPVPHREFVVEAATAHFTG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHCC HRRITRKRAAPRFNLAILHDPANPEPPSNARAMRRFEKAAEELGLQVALITRNDLERLPR CHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC FDALFIRDTTYPNHYTYSFSRRAAAEGLVVIDDPDSILKCNNKVYLAELHVRHHIPAPRT CEEEEEEECCCCCCEEEECCHHHHHCCEEEEECCCHHHCCCCEEEEEEEEEHHCCCCCCE LVVHQGNIGAIVATLGLPCVLKQPDSSGSLGVDRVDTEPELLAKVRTMLRKSELVVAQEW EEEECCCCCEEHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEHHC LPTAFDWRIGVLDHRPLYVCKYFMAPGHWQIVKREPGRKGYQEGRVKAVAVAEVPEEVIK CCCCCCEEEEEECCCHHEEEHHHCCCCCEEEEEECCCCCCCHHCCEEEEEEHHHHHHHHH IALQTADLIGDGLYGVDVKVVGNRCYVIEVNDNPNIDAGNEDGVLKDALYREIMGSFVRR HHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LEARKLGHPQ HHHHHCCCCC >Mature Secondary Structure MRVLIVVDDPPDWPLDIPGIGVVAAEAYLTDPTYGDDRSVKVFNLCRSYRYQSTGYYVSL CEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEE LAEARGHRPLPRVGTIEDLASPKLLPLLVGDLDALVQTALAPIKSQSFELSIYFGRNVAS EEHHCCCCCCCCCCCHHHHCCCCEEHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHH RYDALSQQLFARLQAPLLRAYFERRNGDWRLAEVQAIAASEIPVPHREFVVEAATAHFTG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHCC HRRITRKRAAPRFNLAILHDPANPEPPSNARAMRRFEKAAEELGLQVALITRNDLERLPR CHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC FDALFIRDTTYPNHYTYSFSRRAAAEGLVVIDDPDSILKCNNKVYLAELHVRHHIPAPRT CEEEEEEECCCCCCEEEECCHHHHHCCEEEEECCCHHHCCCCEEEEEEEEEHHCCCCCCE LVVHQGNIGAIVATLGLPCVLKQPDSSGSLGVDRVDTEPELLAKVRTMLRKSELVVAQEW EEEECCCCCEEHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEHHC LPTAFDWRIGVLDHRPLYVCKYFMAPGHWQIVKREPGRKGYQEGRVKAVAVAEVPEEVIK CCCCCCEEEEEECCCHHEEEHHHCCCCCEEEEEECCCCCCCHHCCEEEEEEHHHHHHHHH IALQTADLIGDGLYGVDVKVVGNRCYVIEVNDNPNIDAGNEDGVLKDALYREIMGSFVRR HHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LEARKLGHPQ HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA