| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317472
Identifier: 74317472
GI number: 74317472
Start: 1537707
End: 1538939
Strand: Direct
Name: 74317472
Synonym: Tbd_1454
Alternate gene names: NA
Gene position: 1537707-1538939 (Clockwise)
Preceding gene: 74317471
Following gene: 74317473
Centisome position: 52.85
GC content: 71.61
Gene sequence:
>1233_bases ATGAATCCGCCTGCGCTCGACGCCTTTGCGGGTTACGGCGTCGAGCTCGAATACATGGTCGTCGCGCGCGACACGCTCGC CGTGCTGCCGATCGCCGACCGTCTGCTCGCGAGCGCCGCCGGCCGCGCGGCCAGCGCGGTCGTGCGCGGCGGTTTCGGCT GGTGCAACGAAATCGTCCTGCATCTGGTCGAGATCAAGAATCAGGCGCCCGCCCCGGCGCTCGCGCCGCTCGCCGCCGGC TTTCAGGCCGAGGTCGCCGCGATCGGGCAATTTCTGCAGCCGCTCGGCGCGCGCCTCATGCCGACCGGTATGCATCCGTG GATGGACCCGCGGCGCGAAACCCGCCTCTGGGCGGACGATCCGGCCGGCATCTACCGCGCCTACGACCGCATCTTCGACT GCCACAGCCACGGCCAGGCCAACCTGCAGAGCATGCAGCTCAACCTGCCCTTCGCCGACGACACGCAATTCGCCCGCCTG CACGCCGCGATCCGGCTCGTCCTTCCGATCCTGCCCGCGATCGCCGCGAGCTCGCCCCTGGCCGATGGCCGTCCGGCCGC CCACCTCGACGCGCGCATGGCCGCCTACGCCGGCGCCGTCGCGCGGGTTCCCGCCGTGATCGGCGAACTCGTGCCCGACA CGGCCACCGGCCGCGCCGACTATGTCGAACAGGTGCTCGCGCCGATGTACCGCGCGATCGCGCCGCTCGACCCGGACGGT GTGCTGCAGCACGAATGGCTCAACGCGCGCGGCGCAATTCCGCGCTTTGAACGCGACGCGATCGAAATCCGCGTGGTCGA CATGCAGGAATGCCCCGCGGCCGACCTCGCGATCGCCGCGGCGACCGCGGCGGCGGTGCGCGCGCTCTACGACGCGACCT GGTCGTCGCTGTCCGAACAACAGGCGATCGCGACCCCCGTCCTCACGCGGCTGATGCACGCCTGCGTGCGGTACGGCGAC GCGGCACTGATCGACGACGGGCCCTATCTGCGGCTGCTCGGACTACCTGCCCACCCCGTCGCGGCGGCCGAGGTCTGGCA GCACCTGATCGAAACCACCGGCGTCGGTCGCGCCGCGCCCTGGCGCGAGCCGCTGCAATGCATGCAGCAGCAGGGACCGC TCGCGCGCCGGATCTTGCGCGCCCTCGGGGCCGATGCGACGCGGCAGCGCCAGCATGCGGTCTACGAAGCGCTCTGCGAT TGCCTCGATGCCGGGCGGATGTTCACGCCGTGA
Upstream 100 bases:
>100_bases ACGCCGGCAACGAAGACGGCGTGCTGAAGGACGCGCTCTACCGCGAAATCATGGGCTCCTTCGTGCGTCGCCTCGAGGCC CGCAAGCTGGGTCATCCCCA
Downstream 100 bases:
>100_bases CGATGCCCGGGAGACCCGCGCTCCTGATCAGTTGCGAACATGGCGGCAGGCGCATTCCACCGCCCTACCGCAGCCTGTTT GCCGGCCACGACGCGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MNPPALDAFAGYGVELEYMVVARDTLAVLPIADRLLASAAGRAASAVVRGGFGWCNEIVLHLVEIKNQAPAPALAPLAAG FQAEVAAIGQFLQPLGARLMPTGMHPWMDPRRETRLWADDPAGIYRAYDRIFDCHSHGQANLQSMQLNLPFADDTQFARL HAAIRLVLPILPAIAASSPLADGRPAAHLDARMAAYAGAVARVPAVIGELVPDTATGRADYVEQVLAPMYRAIAPLDPDG VLQHEWLNARGAIPRFERDAIEIRVVDMQECPAADLAIAAATAAAVRALYDATWSSLSEQQAIATPVLTRLMHACVRYGD AALIDDGPYLRLLGLPAHPVAAAEVWQHLIETTGVGRAAPWREPLQCMQQQGPLARRILRALGADATRQRQHAVYEALCD CLDAGRMFTP
Sequences:
>Translated_410_residues MNPPALDAFAGYGVELEYMVVARDTLAVLPIADRLLASAAGRAASAVVRGGFGWCNEIVLHLVEIKNQAPAPALAPLAAG FQAEVAAIGQFLQPLGARLMPTGMHPWMDPRRETRLWADDPAGIYRAYDRIFDCHSHGQANLQSMQLNLPFADDTQFARL HAAIRLVLPILPAIAASSPLADGRPAAHLDARMAAYAGAVARVPAVIGELVPDTATGRADYVEQVLAPMYRAIAPLDPDG VLQHEWLNARGAIPRFERDAIEIRVVDMQECPAADLAIAAATAAAVRALYDATWSSLSEQQAIATPVLTRLMHACVRYGD AALIDDGPYLRLLGLPAHPVAAAEVWQHLIETTGVGRAAPWREPLQCMQQQGPLARRILRALGADATRQRQHAVYEALCD CLDAGRMFTP >Mature_410_residues MNPPALDAFAGYGVELEYMVVARDTLAVLPIADRLLASAAGRAASAVVRGGFGWCNEIVLHLVEIKNQAPAPALAPLAAG FQAEVAAIGQFLQPLGARLMPTGMHPWMDPRRETRLWADDPAGIYRAYDRIFDCHSHGQANLQSMQLNLPFADDTQFARL HAAIRLVLPILPAIAASSPLADGRPAAHLDARMAAYAGAVARVPAVIGELVPDTATGRADYVEQVLAPMYRAIAPLDPDG VLQHEWLNARGAIPRFERDAIEIRVVDMQECPAADLAIAAATAAAVRALYDATWSSLSEQQAIATPVLTRLMHACVRYGD AALIDDGPYLRLLGLPAHPVAAAEVWQHLIETTGVGRAAPWREPLQCMQQQGPLARRILRALGADATRQRQHAVYEALCD CLDAGRMFTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 44162; Mature: 44162
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPALDAFAGYGVELEYMVVARDTLAVLPIADRLLASAAGRAASAVVRGGFGWCNEIVL CCCCCCCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH HLVEIKNQAPAPALAPLAAGFQAEVAAIGQFLQPLGARLMPTGMHPWMDPRRETRLWADD HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC PAGIYRAYDRIFDCHSHGQANLQSMQLNLPFADDTQFARLHAAIRLVLPILPAIAASSPL CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ADGRPAAHLDARMAAYAGAVARVPAVIGELVPDTATGRADYVEQVLAPMYRAIAPLDPDG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VLQHEWLNARGAIPRFERDAIEIRVVDMQECPAADLAIAAATAAAVRALYDATWSSLSEQ CHHHHHHCCCCCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAIATPVLTRLMHACVRYGDAALIDDGPYLRLLGLPAHPVAAAEVWQHLIETTGVGRAAP HHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC WREPLQCMQQQGPLARRILRALGADATRQRQHAVYEALCDCLDAGRMFTP CHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNPPALDAFAGYGVELEYMVVARDTLAVLPIADRLLASAAGRAASAVVRGGFGWCNEIVL CCCCCCCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH HLVEIKNQAPAPALAPLAAGFQAEVAAIGQFLQPLGARLMPTGMHPWMDPRRETRLWADD HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC PAGIYRAYDRIFDCHSHGQANLQSMQLNLPFADDTQFARLHAAIRLVLPILPAIAASSPL CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ADGRPAAHLDARMAAYAGAVARVPAVIGELVPDTATGRADYVEQVLAPMYRAIAPLDPDG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VLQHEWLNARGAIPRFERDAIEIRVVDMQECPAADLAIAAATAAAVRALYDATWSSLSEQ CHHHHHHCCCCCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAIATPVLTRLMHACVRYGDAALIDDGPYLRLLGLPAHPVAAAEVWQHLIETTGVGRAAP HHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC WREPLQCMQQQGPLARRILRALGADATRQRQHAVYEALCDCLDAGRMFTP CHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]