| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317375
Identifier: 74317375
GI number: 74317375
Start: 1437959
End: 1438417
Strand: Reverse
Name: 74317375
Synonym: Tbd_1357
Alternate gene names: NA
Gene position: 1438417-1437959 (Counterclockwise)
Preceding gene: 74317376
Following gene: 74317374
Centisome position: 49.43
GC content: 66.67
Gene sequence:
>459_bases ATGCACCATCGACTTCCACGCAAAGCCGTTCGCCTTGTCGTCGTCGGCGCCTTGCTCGCCGCGGCTGGCGCAGCGGTCGC TGCCGAACCCGACAAAGCCAGGCCGCTCGCGCTGCGCAAGATCATGCAGGATCTCGGCACGAACATGCAGCGCATCACCG ACGGCATTTCGCGCGAGGACTGGGAAACCGTCGCACGCATCGCGCCCGCCATCGGCGAGCACCCGCAGCCGCCGCTCGTC GAAAAGATGCGCATCCTGAAATTCGCCGGCAGCGACGCCGGCAAGTTCAAGGGCTACGACGAGAAAACCCACACCGCGGC GCAGGCCCTGCAACAGGCGGCGCAGCGCGGCGACGGGCGGGCGGTGATCGCCGCGTTCGCGACGCTGCAAAACACCTGCC TGGCCTGTCACGAGAGCTTCCGCAAGCCTTTCGTGGAGCATTTCTATGGCGAGCGCTGA
Upstream 100 bases:
>100_bases GGCGCGCGGGCCGAATAGTTGGGGCCGCCCGCGAGGGGAGGGCGCCTCGACCTCGCCGGGCGTAAGCCAGAAACAGGGAT TAACTTTCAAGGAGACCTTC
Downstream 100 bases:
>100_bases AGCCAAGCCGACCGCCGATGCAGGGGGTTCGGGCGCGAGGCGTACTTGCACTCGCGCCGTCGTGGCCTCGGCGGTACTGG CCAGCCTGCTCGCCGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MHHRLPRKAVRLVVVGALLAAAGAAVAAEPDKARPLALRKIMQDLGTNMQRITDGISREDWETVARIAPAIGEHPQPPLV EKMRILKFAGSDAGKFKGYDEKTHTAAQALQQAAQRGDGRAVIAAFATLQNTCLACHESFRKPFVEHFYGER
Sequences:
>Translated_152_residues MHHRLPRKAVRLVVVGALLAAAGAAVAAEPDKARPLALRKIMQDLGTNMQRITDGISREDWETVARIAPAIGEHPQPPLV EKMRILKFAGSDAGKFKGYDEKTHTAAQALQQAAQRGDGRAVIAAFATLQNTCLACHESFRKPFVEHFYGER >Mature_152_residues MHHRLPRKAVRLVVVGALLAAAGAAVAAEPDKARPLALRKIMQDLGTNMQRITDGISREDWETVARIAPAIGEHPQPPLV EKMRILKFAGSDAGKFKGYDEKTHTAAQALQQAAQRGDGRAVIAAFATLQNTCLACHESFRKPFVEHFYGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16636; Mature: 16636
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS51009 CYTCII
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHRLPRKAVRLVVVGALLAAAGAAVAAEPDKARPLALRKIMQDLGTNMQRITDGISRED CCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHH WETVARIAPAIGEHPQPPLVEKMRILKFAGSDAGKFKGYDEKTHTAAQALQQAAQRGDGR HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH AVIAAFATLQNTCLACHESFRKPFVEHFYGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHHRLPRKAVRLVVVGALLAAAGAAVAAEPDKARPLALRKIMQDLGTNMQRITDGISRED CCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHH WETVARIAPAIGEHPQPPLVEKMRILKFAGSDAGKFKGYDEKTHTAAQALQQAAQRGDGR HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH AVIAAFATLQNTCLACHESFRKPFVEHFYGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA