| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317365
Identifier: 74317365
GI number: 74317365
Start: 1427663
End: 1428100
Strand: Reverse
Name: 74317365
Synonym: Tbd_1347
Alternate gene names: NA
Gene position: 1428100-1427663 (Counterclockwise)
Preceding gene: 74317366
Following gene: 74317364
Centisome position: 49.08
GC content: 66.67
Gene sequence:
>438_bases ATGATTGAAAAACACCGCCGCCGCAAGCAGCCGCGCAGTCACCCGCACTTCGTGTGGGCCGATCCCGATCAGTTCCACGT CGAGCGTCTGACGGCCGGCCTGACGCAGAAATCGGCCGCCGAATACCTCGGCGTCTCGCTGCGCACCGTGCGCAACTGGG AGACCGGCTGCAACCGCATCCCCTACCCGGCTTTCAAGCTCGTCAGGATGCGCGCGAAGGCCATCGTCCACGTCGAGGGG TGGGACGGCTGGCGTTTCGACCGTGACGGCGCTTTGGTGACGCCGGAGGGCTACGCGTTTCAGCCGTGGGAGATTCAGCA GCTTCGTCTGGTCGTCGGGCTCGCTCGCCGTTACGTGGAAGGGCGTTACGTGGCGGCTGCGCCTGCGGCCCTGCCCGCCT TCGCGGAAAAGGTGCCAGTGCTGCGGAGGGTCGCATGA
Upstream 100 bases:
>100_bases CGCCCTTACGTTGGGCCGGACTTCGACCCCGACGACATCGACTTCGGCCTTCCGGCCGACCTCGAGGGCGTTCCGGCCGA GCTTCTGACGGGGGGCCGCG
Downstream 100 bases:
>100_bases GCGCCCGGAAGGCAGGCGGCAACGCCACGCGGCAGCGCGTCAGCGCGACGCGGCGGCGTGACGCTGCCCCAATGGCTGCA TTCCGCGAGATTCCGCGCAG
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA
Sequences:
>Translated_145_residues MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA >Mature_145_residues MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16730; Mature: 16730
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRI CCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCC PYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVE CCHHHHHHHHHHHEEEEEECCCCCEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHC GRYVAAAPAALPAFAEKVPVLRRVA CCEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRI CCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCC PYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVE CCHHHHHHHHHHHEEEEEECCCCCEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHC GRYVAAAPAALPAFAEKVPVLRRVA CCEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA