| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317364
Identifier: 74317364
GI number: 74317364
Start: 1427004
End: 1427666
Strand: Reverse
Name: 74317364
Synonym: Tbd_1346
Alternate gene names: NA
Gene position: 1427666-1427004 (Counterclockwise)
Preceding gene: 74317365
Following gene: 74317363
Centisome position: 49.06
GC content: 59.13
Gene sequence:
>663_bases ATGAGCGCCCGGAAGGCAGGCGGCAACGCCACGCGGCAGCGCGTCAGCGCGACGCGGCGGCGTGACGCTGCCCCAATGGC TGCATTCCGCGAGATTCCGCGCAGCACGTCGACCTGGTCACCCACCGGACAGGCGTCAGCCTGCAAGCCGAGCCAACGGA CAGCAGTCGTCCGCTGGCTCGTTGCTACCGCCGGTTCGGCGCGCACCGACCGCGGGCCGTTCCCCGAAGTGAAAGCCTGC ATTCCTCAGCACGTCCTCGAGGCCGCCCCCAGCGGCCGAAGCACCGACGCCAGCGACCCGCTGGACTTGTTCCCGAACCC CGGAGGCCCTACGATGGCAAGAATTGCCCCAAGTTTTTTTTATGACCCGCTGAAATTGGTTCCTCTTGGCGGATTCGATC AACCGGACGACGAAAAGACAAAAACCGTCTGTAAGCCATTGATCCCACGAAGATATACATTATGCGAATTATGGGAGGCT CAGAGCAAGCCCTGCAGGCGCGGGTGTAAGAACCAGAGCAACCTGCTAAATCGCAACTTAAGGCTGCTAAATCGTACAAC TGCAACCTGCTCACCCAAGGTCAATCGATTCAATGACTTACGACGTGGATGCCTGCCTGCTAACCATGATTCAATAAAAA CAAGGACTTATGGCAGCCGATGA
Upstream 100 bases:
>100_bases TCGGGCTCGCTCGCCGTTACGTGGAAGGGCGTTACGTGGCGGCTGCGCCTGCGGCCCTGCCCGCCTTCGCGGAAAAGGTG CCAGTGCTGCGGAGGGTCGC
Downstream 100 bases:
>100_bases AACAAGTTCATGTTGCTAACTCGGGATGCATGAAAACAAGGACTTACAGAGCGGCCAGCCAACAAGTTCAACCTGCTAAC CGCGCCCCCTTTGGATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSARKAGGNATRQRVSATRRRDAAPMAAFREIPRSTSTWSPTGQASACKPSQRTAVVRWLVATAGSARTDRGPFPEVKAC IPQHVLEAAPSGRSTDASDPLDLFPNPGGPTMARIAPSFFYDPLKLVPLGGFDQPDDEKTKTVCKPLIPRRYTLCELWEA QSKPCRRGCKNQSNLLNRNLRLLNRTTATCSPKVNRFNDLRRGCLPANHDSIKTRTYGSR
Sequences:
>Translated_220_residues MSARKAGGNATRQRVSATRRRDAAPMAAFREIPRSTSTWSPTGQASACKPSQRTAVVRWLVATAGSARTDRGPFPEVKAC IPQHVLEAAPSGRSTDASDPLDLFPNPGGPTMARIAPSFFYDPLKLVPLGGFDQPDDEKTKTVCKPLIPRRYTLCELWEA QSKPCRRGCKNQSNLLNRNLRLLNRTTATCSPKVNRFNDLRRGCLPANHDSIKTRTYGSR >Mature_219_residues SARKAGGNATRQRVSATRRRDAAPMAAFREIPRSTSTWSPTGQASACKPSQRTAVVRWLVATAGSARTDRGPFPEVKACI PQHVLEAAPSGRSTDASDPLDLFPNPGGPTMARIAPSFFYDPLKLVPLGGFDQPDDEKTKTVCKPLIPRRYTLCELWEAQ SKPCRRGCKNQSNLLNRNLRLLNRTTATCSPKVNRFNDLRRGCLPANHDSIKTRTYGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24237; Mature: 24106
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARKAGGNATRQRVSATRRRDAAPMAAFREIPRSTSTWSPTGQASACKPSQRTAVVRWL CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VATAGSARTDRGPFPEVKACIPQHVLEAAPSGRSTDASDPLDLFPNPGGPTMARIAPSFF HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH YDPLKLVPLGGFDQPDDEKTKTVCKPLIPRRYTLCELWEAQSKPCRRGCKNQSNLLNRNL CCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHH RLLNRTTATCSPKVNRFNDLRRGCLPANHDSIKTRTYGSR HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SARKAGGNATRQRVSATRRRDAAPMAAFREIPRSTSTWSPTGQASACKPSQRTAVVRWL CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VATAGSARTDRGPFPEVKACIPQHVLEAAPSGRSTDASDPLDLFPNPGGPTMARIAPSFF HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH YDPLKLVPLGGFDQPDDEKTKTVCKPLIPRRYTLCELWEAQSKPCRRGCKNQSNLLNRNL CCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHH RLLNRTTATCSPKVNRFNDLRRGCLPANHDSIKTRTYGSR HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA