| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cusB [H]
Identifier: 74317352
GI number: 74317352
Start: 1417804
End: 1419297
Strand: Reverse
Name: cusB [H]
Synonym: Tbd_1334
Alternate gene names: 74317352
Gene position: 1419297-1417804 (Counterclockwise)
Preceding gene: 74317353
Following gene: 74317351
Centisome position: 48.78
GC content: 69.54
Gene sequence:
>1494_bases ATGAATCGCCAAACGATTAAAAAAACCGTGCTGGGCCTCTTCGTCGTGGTTGCACTGCTCGCCGCCGGCGTGGCGGCCGG CCTCTGGTGGGCCGGCCGCTACCCCACGGATACGCAGGATACCCACACCGCGGCCCCCGCGCAGCATGGTCGCACCGTGC TGTACTGGTACGACCCGATGGTGCCGCAGCAAAAATTCGACAAGCCCGGCAAGTCGCCTTTCATGGACATGGATCTGGTG CCCAAATACGCCGACGAAGGCGGCGATGCCGCAACCGTCAAAATCGACCCCTGGGTGGCGCAGAACCTGGGCGTGCGTCT GGCCACCGTCACCCACGCACCCTTCGGCAGCGACGTGACGGCGACCGGCGTCGTCGGCTTCGACGAGCGCGAGGTGGCGA TCGTGCAGGCGCGCAGCGGCGGCTTCGTGGAACGCGTGGCTAGGCTGGCGCCGAACGATGTCGTTCGATCGGGCGCCTTG ATCGCGGAACTGCTGGTGCCGGAGTGGGCGGCGGTGCAGCAGGAGTACCTGGCGCTCAAGGCGCTGGGCGACCCCTCACT GGAAGGCGCCGCGCGCGAGCGCATGCGCTTGAGCGGCATGCCGGAAAGCCTGATTCGCGACGTCGCCGCCCGCGGCAAGA TCAGGAATCGCATTGCGATCACCGCGCCGCGGGGCGGCGTGATCCAGGAACTCGACGTGCGCGCCGGCATGACCGTGATG GGCGGCCAGACTTTGGCGCGCATCAACGGCATCGGCACCGTCTGGCTCGACGTCGCGGTGCCGGAAGCCCGCGCCGGCTC GGTGCGGATCGGGCAGGCGGCCGAGGCCCATTTCGCTGCGTTTCCGGGCGAACCGGTGCAGGGCCGCGTCACCGCGCTGC TGCCGGCGCTGGACGATACCGCCCGCACGCTGAGGGTCCGAGTCGAACTGCCCAATCCCGGCGGGCGCCTGCGGCCGGGA TTGACCGCGCAGGTCAGCCTCAGGGGGGCGGGCGGCGACTCGGCGCTGCGCGTGCCAACCGAAGCGGTGATCCGCACCGG ACGCCGCGCGCTCGTCGTCGTGGCGGAGGCTGAGGGGCGCTACCGGCCGGTCGAAGTCACATTGGGCGCCGAGTCGGGCA GCGACACCGTCATCCTGTCCGGCCTCGCCGAGGGCCAGAAAGTCGTCGCCAGCGGCCAGTTCCTGATTGACTCCGAAGCC AGCCTGCAGGGCATCGTCGCGCGCGGGACAGGCGAAGCGGCCGCCGCGCCGGCCGCGCTGCACGAGGCTGATGGCGTAAT CGACGACATTTCCGCCGAATATGTGACGCTCACCCACGGCCCCTTCAAGACCCTGGCGATGCCCGGCATGACCATGGAGT TTCCGCTGGCCCGCCCTGAACTCGCCAAGGGCCTGAAGGCGGGCGACCGGGTGAGGGTCGGCGCGCGCGAGACCGCCGAC GGGCTGGTAGTCGAAAAACTCGTCAAGACCGACAAGACGGGGGGCGCCAAATGA
Upstream 100 bases:
>100_bases ACGCCGAACTCATGGCCATCGCGCTCGAAGGCGAGCGCCGACAGTTGGCCGCCCGCCTGCTCTATGCCTACAGCGAACCC GATTTGACCGGAGAAAAACA
Downstream 100 bases:
>100_bases TTGCGCGCCTGATTCGCTGGTCGGTCGCCAACCGTTTCCTGGTCCTGCTGGCGACGCTGTTCACCGTGGCCTGGGGCATC TGGGCGGTTAAGACCACGCC
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNRQTIKKTVLGLFVVVALLAAGVAAGLWWAGRYPTDTQDTHTAAPAQHGRTVLYWYDPMVPQQKFDKPGKSPFMDMDLV PKYADEGGDAATVKIDPWVAQNLGVRLATVTHAPFGSDVTATGVVGFDEREVAIVQARSGGFVERVARLAPNDVVRSGAL IAELLVPEWAAVQQEYLALKALGDPSLEGAARERMRLSGMPESLIRDVAARGKIRNRIAITAPRGGVIQELDVRAGMTVM GGQTLARINGIGTVWLDVAVPEARAGSVRIGQAAEAHFAAFPGEPVQGRVTALLPALDDTARTLRVRVELPNPGGRLRPG LTAQVSLRGAGGDSALRVPTEAVIRTGRRALVVVAEAEGRYRPVEVTLGAESGSDTVILSGLAEGQKVVASGQFLIDSEA SLQGIVARGTGEAAAAPAALHEADGVIDDISAEYVTLTHGPFKTLAMPGMTMEFPLARPELAKGLKAGDRVRVGARETAD GLVVEKLVKTDKTGGAK
Sequences:
>Translated_497_residues MNRQTIKKTVLGLFVVVALLAAGVAAGLWWAGRYPTDTQDTHTAAPAQHGRTVLYWYDPMVPQQKFDKPGKSPFMDMDLV PKYADEGGDAATVKIDPWVAQNLGVRLATVTHAPFGSDVTATGVVGFDEREVAIVQARSGGFVERVARLAPNDVVRSGAL IAELLVPEWAAVQQEYLALKALGDPSLEGAARERMRLSGMPESLIRDVAARGKIRNRIAITAPRGGVIQELDVRAGMTVM GGQTLARINGIGTVWLDVAVPEARAGSVRIGQAAEAHFAAFPGEPVQGRVTALLPALDDTARTLRVRVELPNPGGRLRPG LTAQVSLRGAGGDSALRVPTEAVIRTGRRALVVVAEAEGRYRPVEVTLGAESGSDTVILSGLAEGQKVVASGQFLIDSEA SLQGIVARGTGEAAAAPAALHEADGVIDDISAEYVTLTHGPFKTLAMPGMTMEFPLARPELAKGLKAGDRVRVGARETAD GLVVEKLVKTDKTGGAK >Mature_497_residues MNRQTIKKTVLGLFVVVALLAAGVAAGLWWAGRYPTDTQDTHTAAPAQHGRTVLYWYDPMVPQQKFDKPGKSPFMDMDLV PKYADEGGDAATVKIDPWVAQNLGVRLATVTHAPFGSDVTATGVVGFDEREVAIVQARSGGFVERVARLAPNDVVRSGAL IAELLVPEWAAVQQEYLALKALGDPSLEGAARERMRLSGMPESLIRDVAARGKIRNRIAITAPRGGVIQELDVRAGMTVM GGQTLARINGIGTVWLDVAVPEARAGSVRIGQAAEAHFAAFPGEPVQGRVTALLPALDDTARTLRVRVELPNPGGRLRPG LTAQVSLRGAGGDSALRVPTEAVIRTGRRALVVVAEAEGRYRPVEVTLGAESGSDTVILSGLAEGQKVVASGQFLIDSEA SLQGIVARGTGEAAAAPAALHEADGVIDDISAEYVTLTHGPFKTLAMPGMTMEFPLARPELAKGLKAGDRVRVGARETAD GLVVEKLVKTDKTGGAK
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=404, Percent_Identity=41.0891089108911, Blast_Score=298, Evalue=6e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52321; Mature: 52321
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQTIKKTVLGLFVVVALLAAGVAAGLWWAGRYPTDTQDTHTAAPAQHGRTVLYWYDPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEECCC VPQQKFDKPGKSPFMDMDLVPKYADEGGDAATVKIDPWVAQNLGVRLATVTHAPFGSDVT CCHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHCCCCEEEEEEEECCCCCCCE ATGVVGFDEREVAIVQARSGGFVERVARLAPNDVVRSGALIAELLVPEWAAVQQEYLALK EEEEECCCCCEEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHH ALGDPSLEGAARERMRLSGMPESLIRDVAARGKIRNRIAITAPRGGVIQELDVRAGMTVM CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHCCCEEE GGQTLARINGIGTVWLDVAVPEARAGSVRIGQAAEAHFAAFPGEPVQGRVTALLPALDDT CCCEEEEECCCEEEEEEEECCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEECCCCCC ARTLRVRVELPNPGGRLRPGLTAQVSLRGAGGDSALRVPTEAVIRTGRRALVVVAEAEGR CEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEECCCC YRPVEVTLGAESGSDTVILSGLAEGQKVVASGQFLIDSEASLQGIVARGTGEAAAAPAAL EEEEEEEEECCCCCCEEEEEECCCCCEEEECCCEEEECCCCCEEEEEECCCCHHHCCHHH HEADGVIDDISAEYVTLTHGPFKTLAMPGMTMEFPLARPELAKGLKAGDRVRVGARETAD HHHCCCCCCCCCCEEEEECCCCHHHCCCCCEEECCCCCHHHHHCCCCCCEEEECCCCCCC GLVVEKLVKTDKTGGAK HHHHHHHHHCCCCCCCC >Mature Secondary Structure MNRQTIKKTVLGLFVVVALLAAGVAAGLWWAGRYPTDTQDTHTAAPAQHGRTVLYWYDPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEECCC VPQQKFDKPGKSPFMDMDLVPKYADEGGDAATVKIDPWVAQNLGVRLATVTHAPFGSDVT CCHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHCCCCEEEEEEEECCCCCCCE ATGVVGFDEREVAIVQARSGGFVERVARLAPNDVVRSGALIAELLVPEWAAVQQEYLALK EEEEECCCCCEEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHH ALGDPSLEGAARERMRLSGMPESLIRDVAARGKIRNRIAITAPRGGVIQELDVRAGMTVM CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHCCCEEE GGQTLARINGIGTVWLDVAVPEARAGSVRIGQAAEAHFAAFPGEPVQGRVTALLPALDDT CCCEEEEECCCEEEEEEEECCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEECCCCCC ARTLRVRVELPNPGGRLRPGLTAQVSLRGAGGDSALRVPTEAVIRTGRRALVVVAEAEGR CEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEECCCC YRPVEVTLGAESGSDTVILSGLAEGQKVVASGQFLIDSEASLQGIVARGTGEAAAAPAAL EEEEEEEEECCCCCCEEEEEECCCCCEEEECCCEEEECCCCCEEEEEECCCCHHHCCHHH HEADGVIDDISAEYVTLTHGPFKTLAMPGMTMEFPLARPELAKGLKAGDRVRVGARETAD HHHCCCCCCCCCCEEEEECCCCHHHCCCCCEEECCCCCHHHHHCCCCCCEEEECCCCCCC GLVVEKLVKTDKTGGAK HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]