Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317353

Identifier: 74317353

GI number: 74317353

Start: 1419294

End: 1420583

Strand: Reverse

Name: 74317353

Synonym: Tbd_1335

Alternate gene names: NA

Gene position: 1420583-1419294 (Counterclockwise)

Preceding gene: 74317354

Following gene: 74317352

Centisome position: 48.82

GC content: 68.06

Gene sequence:

>1290_bases
ATGGTCACCTCCCTATCTGCCGCCCGCACGCTGCGGCCCACGCTTTGCCGTAGCGTTGCGCTGTTCGCACTGTCGGGCCT
CGCCAGCACGGCATGCGCGGCGTCTCTTTCCTTCGATGACGCGCTCGCGCTGGCCGTGCGGGAAACCCCAGTATTGCGCA
GCGTCGCGGCGCAGAGCGACGCCGCGCGCAAAACAGCGATTCCGGCCGGCGAATTGCCGGATCCAAAGCTGGTGCTCGGC
ATCGACAACCTGCCTATTGAAGGCGCCGACCGTTTCAGCCTGACCGGCGACGGCATGACCATGCAGCGCCTCGGCCTCAT
GCAGGAATTCCCCAACGCCGCCAAGCGTGCTGCCCGCGTTTCGGCGGCGCAGGGACGCGTTGCCCAGGCGGAAGCGCAAA
CACGCATCACCCGGCTCGCTGTGTTGCGGGAAACGGCGGTCGCCTGGATTGCGCGGGATGCCGTCGAGCGCCAGCTCGCC
CGCATCGATTCGCTGGAGGGCGAGAACCACCTGTTAGATGCCGTGGTGCGTGCCCGTATCGCCGGCGGCAAGGGCAGTGC
GCTGGAGGCGCTGGCGTCGCGTCAGGAAGCCGCGATGATCGATGCGCGCCGGGATGAGCTGACTGCGCGCCGCCAACAAG
CCATCGCGGCGCTCAGACGCTGGGTCGGGCCGCGGGCGGAGGCGCCACTGGAAGGCAGCGTTCCGGACTGGCCGGTCGTC
CACGGCAAGCTCGCGCACGCGCTGCATGATCACCCGGAGCTGGCGATATTCGAGCCTAGGGGGCGCGTGCTGGATGCGGA
AGCGGCCGAAGCCCGCGCTGAGAAGAAACCCGACTGGACGCTGGAACTGGCATACCAGAAGCGCGGCGCGCGGTTCGGCG
ATATGGCCATGGTGCAGGTGAGCTTTGACCTGCCGGTGTTTGCCGCCGCCCGCCAGGATCCGAAGATCGCGGCCCGGCTT
GCCGAGCGCGAAGGACTTGATGCCGAACGCGAAGCGGTGTTGCGCGAACACGCGGCGATGCTGGAGACGGATTTTGCTGA
GCACCAGCGCCTCGCCCTCGCCGTCAAGCGCCAGCGCGAAGTGCTGCTGCCGCTGGCCGGCGAAAAGGTGGATCTGGCGC
TGGCGGCCTGGCGCAGCGGCAAGGGCGAGCTCGTCGATCTGGTGATGGCGCGGCGCGAGCGCATCGACGCCGAACTCATG
GCCATCGCGCTCGAAGGCGAGCGCCGACAGTTGGCCGCCCGCCTGCTCTATGCCTACAGCGAACCCGATTTGACCGGAGA
AAAACAATGA

Upstream 100 bases:

>100_bases
GTGCTGCACTGCGTTCGCCCCGCGCGGACGACAGTTCGGCTATTTCGTGCCATCACGCCGCTACCGGTCTGATGTTGCCG
TTCTCGCAAGGAGTTGGAAC

Downstream 100 bases:

>100_bases
ATCGCCAAACGATTAAAAAAACCGTGCTGGGCCTCTTCGTCGTGGTTGCACTGCTCGCCGCCGGCGTGGCGGCCGGCCTC
TGGTGGGCCGGCCGCTACCC

Product: CzcC family heavy metal RND efflux outer membrane protein

Products: NA

Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Outer Membrane Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Heavy Metal RND Efflux CzcC Family; Cation Resistance Protein CzcC; Efflux System Outer Membrane Protein; Outer Membrane Silver Efflux Protein; Outer Membrane Cation Efflux System Protein CzcC; Cation Efflux Protein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MVTSLSAARTLRPTLCRSVALFALSGLASTACAASLSFDDALALAVRETPVLRSVAAQSDAARKTAIPAGELPDPKLVLG
IDNLPIEGADRFSLTGDGMTMQRLGLMQEFPNAAKRAARVSAAQGRVAQAEAQTRITRLAVLRETAVAWIARDAVERQLA
RIDSLEGENHLLDAVVRARIAGGKGSALEALASRQEAAMIDARRDELTARRQQAIAALRRWVGPRAEAPLEGSVPDWPVV
HGKLAHALHDHPELAIFEPRGRVLDAEAAEARAEKKPDWTLELAYQKRGARFGDMAMVQVSFDLPVFAAARQDPKIAARL
AEREGLDAEREAVLREHAAMLETDFAEHQRLALAVKRQREVLLPLAGEKVDLALAAWRSGKGELVDLVMARRERIDAELM
AIALEGERRQLAARLLYAYSEPDLTGEKQ

Sequences:

>Translated_429_residues
MVTSLSAARTLRPTLCRSVALFALSGLASTACAASLSFDDALALAVRETPVLRSVAAQSDAARKTAIPAGELPDPKLVLG
IDNLPIEGADRFSLTGDGMTMQRLGLMQEFPNAAKRAARVSAAQGRVAQAEAQTRITRLAVLRETAVAWIARDAVERQLA
RIDSLEGENHLLDAVVRARIAGGKGSALEALASRQEAAMIDARRDELTARRQQAIAALRRWVGPRAEAPLEGSVPDWPVV
HGKLAHALHDHPELAIFEPRGRVLDAEAAEARAEKKPDWTLELAYQKRGARFGDMAMVQVSFDLPVFAAARQDPKIAARL
AEREGLDAEREAVLREHAAMLETDFAEHQRLALAVKRQREVLLPLAGEKVDLALAAWRSGKGELVDLVMARRERIDAELM
AIALEGERRQLAARLLYAYSEPDLTGEKQ
>Mature_429_residues
MVTSLSAARTLRPTLCRSVALFALSGLASTACAASLSFDDALALAVRETPVLRSVAAQSDAARKTAIPAGELPDPKLVLG
IDNLPIEGADRFSLTGDGMTMQRLGLMQEFPNAAKRAARVSAAQGRVAQAEAQTRITRLAVLRETAVAWIARDAVERQLA
RIDSLEGENHLLDAVVRARIAGGKGSALEALASRQEAAMIDARRDELTARRQQAIAALRRWVGPRAEAPLEGSVPDWPVV
HGKLAHALHDHPELAIFEPRGRVLDAEAAEARAEKKPDWTLELAYQKRGARFGDMAMVQVSFDLPVFAAARQDPKIAARL
AEREGLDAEREAVLREHAAMLETDFAEHQRLALAVKRQREVLLPLAGEKVDLALAAWRSGKGELVDLVMARRERIDAELM
AIALEGERRQLAARLLYAYSEPDLTGEKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46654; Mature: 46654

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSLSAARTLRPTLCRSVALFALSGLASTACAASLSFDDALALAVRETPVLRSVAAQSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
AARKTAIPAGELPDPKLVLGIDNLPIEGADRFSLTGDGMTMQRLGLMQEFPNAAKRAARV
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHH
SAAQGRVAQAEAQTRITRLAVLRETAVAWIARDAVERQLARIDSLEGENHLLDAVVRARI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AGGKGSALEALASRQEAAMIDARRDELTARRQQAIAALRRWVGPRAEAPLEGSVPDWPVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
HGKLAHALHDHPELAIFEPRGRVLDAEAAEARAEKKPDWTLELAYQKRGARFGDMAMVQV
HHHHHHHHCCCCCEEEECCCCCEECCHHHHHHHCCCCCCEEEEHHHHCCCCCCCEEEEEE
SFDLPVFAAARQDPKIAARLAEREGLDAEREAVLREHAAMLETDFAEHQRLALAVKRQRE
EECCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLPLAGEKVDLALAAWRSGKGELVDLVMARRERIDAELMAIALEGERRQLAARLLYAYS
EECCCCCCCEEEEHEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHC
EPDLTGEKQ
CCCCCCCCC
>Mature Secondary Structure
MVTSLSAARTLRPTLCRSVALFALSGLASTACAASLSFDDALALAVRETPVLRSVAAQSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
AARKTAIPAGELPDPKLVLGIDNLPIEGADRFSLTGDGMTMQRLGLMQEFPNAAKRAARV
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHH
SAAQGRVAQAEAQTRITRLAVLRETAVAWIARDAVERQLARIDSLEGENHLLDAVVRARI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AGGKGSALEALASRQEAAMIDARRDELTARRQQAIAALRRWVGPRAEAPLEGSVPDWPVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
HGKLAHALHDHPELAIFEPRGRVLDAEAAEARAEKKPDWTLELAYQKRGARFGDMAMVQV
HHHHHHHHCCCCCEEEECCCCCEECCHHHHHHHCCCCCCEEEEHHHHCCCCCCCEEEEEE
SFDLPVFAAARQDPKIAARLAEREGLDAEREAVLREHAAMLETDFAEHQRLALAVKRQRE
EECCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLPLAGEKVDLALAAWRSGKGELVDLVMARRERIDAELMAIALEGERRQLAARLLYAYS
EECCCCCCCEEEEHEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHC
EPDLTGEKQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA