| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317332
Identifier: 74317332
GI number: 74317332
Start: 1395068
End: 1395787
Strand: Direct
Name: 74317332
Synonym: Tbd_1314
Alternate gene names: NA
Gene position: 1395068-1395787 (Clockwise)
Preceding gene: 74317331
Following gene: 74317333
Centisome position: 47.94
GC content: 54.03
Gene sequence:
>720_bases GTGCTACATAACGGGGTCGCCAAGGAGCGGCTCGTGCCTACGCCAAATCAATCACTGCGATCAACTCTTCGCCGCTCGAT ACGTGAGGTGTATCGGGGAAGGGGCAGAAGGAATAGCAATCTCTGGCTTGTGTATAGCGTAAAGACGGATAGAGACTGGA TCCTTCCGAGTGACCGGCAGCTTGTGCACTGGCTCTACTTCCTCGAGTCTGAACCCACGGTTAGTACCTTTGATTTAGCT CCCGGTCCGATTGTTTCCACGGATGACAAGGAGATAAGGGGCGCAGAGCTCGACGCCGTAGCCGTGTACAGGGATGGGCA TATCGAGTGGCATGAAATAAAAGCAGCGACGCGAAACCCCATCGATCGCTCTCAATTCTTGGCTCAAGCTGCAGCGGCTA CGAAAGAAGGGGTCAAATATACCGTTTTTACTGACCATATCTTACGACCCGTCGCCGCGGTCGCTTTGCGATGGATCAAG CCGCTGAGCTTTGCTGCAATGCTTCGGGGGCAGGAACAGGCCCCGTGCCGCACTTCACTTGCCGCGTATTTTCGTGAACA CAAAAAGGGGACCATCAGGACAGCGCTCACCGATCTCGCGCAATTCGATCAACCAGTAGTGCTGGGGATGATGGTCCGCA TGGGTGTGGAGAATGTAATACATTTTGACTTGAGCCGACGCTCGTTTGGCCTTCAGACCGAGTGGAGTCTCAATGGATAA
Upstream 100 bases:
>100_bases TCAGTTAATGATGAAATTTAGTTCGTGGTTTTGGAAGAGAAACCTTGTAATTTCTGCGGGCTGAACTAAAAGGCACAGTT CGCGGCCACAGAGTTCTAGG
Downstream 100 bases:
>100_bases GCAGCAGCGCTGGAAGCGAACTGAATCGCTAATGGATACTCCAGCAGTCGACACATGGCCGACGGTTGATGTTGCCTCAC TCCGTCCAGAACACCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLHNGVAKERLVPTPNQSLRSTLRRSIREVYRGRGRRNSNLWLVYSVKTDRDWILPSDRQLVHWLYFLESEPTVSTFDLA PGPIVSTDDKEIRGAELDAVAVYRDGHIEWHEIKAATRNPIDRSQFLAQAAAATKEGVKYTVFTDHILRPVAAVALRWIK PLSFAAMLRGQEQAPCRTSLAAYFREHKKGTIRTALTDLAQFDQPVVLGMMVRMGVENVIHFDLSRRSFGLQTEWSLNG
Sequences:
>Translated_239_residues MLHNGVAKERLVPTPNQSLRSTLRRSIREVYRGRGRRNSNLWLVYSVKTDRDWILPSDRQLVHWLYFLESEPTVSTFDLA PGPIVSTDDKEIRGAELDAVAVYRDGHIEWHEIKAATRNPIDRSQFLAQAAAATKEGVKYTVFTDHILRPVAAVALRWIK PLSFAAMLRGQEQAPCRTSLAAYFREHKKGTIRTALTDLAQFDQPVVLGMMVRMGVENVIHFDLSRRSFGLQTEWSLNG >Mature_239_residues MLHNGVAKERLVPTPNQSLRSTLRRSIREVYRGRGRRNSNLWLVYSVKTDRDWILPSDRQLVHWLYFLESEPTVSTFDLA PGPIVSTDDKEIRGAELDAVAVYRDGHIEWHEIKAATRNPIDRSQFLAQAAAATKEGVKYTVFTDHILRPVAAVALRWIK PLSFAAMLRGQEQAPCRTSLAAYFREHKKGTIRTALTDLAQFDQPVVLGMMVRMGVENVIHFDLSRRSFGLQTEWSLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27228; Mature: 27228
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHNGVAKERLVPTPNQSLRSTLRRSIREVYRGRGRRNSNLWLVYSVKTDRDWILPSDRQ CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHH LVHWLYFLESEPTVSTFDLAPGPIVSTDDKEIRGAELDAVAVYRDGHIEWHEIKAATRNP HHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCCC IDRSQFLAQAAAATKEGVKYTVFTDHILRPVAAVALRWIKPLSFAAMLRGQEQAPCRTSL CHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AAYFREHKKGTIRTALTDLAQFDQPVVLGMMVRMGVENVIHFDLSRRSFGLQTEWSLNG HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHNGVAKERLVPTPNQSLRSTLRRSIREVYRGRGRRNSNLWLVYSVKTDRDWILPSDRQ CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHH LVHWLYFLESEPTVSTFDLAPGPIVSTDDKEIRGAELDAVAVYRDGHIEWHEIKAATRNP HHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCCC IDRSQFLAQAAAATKEGVKYTVFTDHILRPVAAVALRWIKPLSFAAMLRGQEQAPCRTSL CHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AAYFREHKKGTIRTALTDLAQFDQPVVLGMMVRMGVENVIHFDLSRRSFGLQTEWSLNG HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA