| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317333
Identifier: 74317333
GI number: 74317333
Start: 1395780
End: 1397759
Strand: Direct
Name: 74317333
Synonym: Tbd_1315
Alternate gene names: NA
Gene position: 1395780-1397759 (Clockwise)
Preceding gene: 74317332
Following gene: 74317334
Centisome position: 47.97
GC content: 51.87
Gene sequence:
>1980_bases ATGGATAAGCAGCAGCGCTGGAAGCGAACTGAATCGCTAATGGATACTCCAGCAGTCGACACATGGCCGACGGTTGATGT TGCCTCACTCCGTCCAGAACACCAGGAAAAGTATGCTGCAAAGAGGGAGGCGGTTCGGTTGTACGTGCAAGGTTACCCCA CTGCAGCAATTTTCGAACGGACCGGGGTTCCTGCAGGGGCATTGGTTCATATGGCGAAGAGATGTACGACCATCGCGGAA GACGGGCAAATAATGGGTTTTCGGGCATTGATCCCCTACTCACATCTAAAAGCTTACGAGCGTAAAGCCGAAGTTAAGAG CAAGCGGCAGGAGCAGAGGGGAGGCCACTCGGGAGCCCTCGGTGCGGTGCTTTCGCGTTATCCAGAAGTGGAAGCCAAAT TGATCTCCTTGATAAGAAAAGAGGCCAAGTCGCGTGAGATTCATGAACACCGAATTCGCCCAAAAGATCTCCATCGGATA TTTCTATCCTGTCTAAAGAACAATGGGGTTTCGTTGGGTGAGTGGCCATTCAATACCAAACACCTAGGAATACGTTCGAT CCAGACCTACATGCGGACGCTCCTAAATACGAGCTTCGAGAGAGCGGTAAACACTAGAGGGGAGCAAGAAGCGAGGGCAC ATCTCGCCGTGGGGCGCGGAATTGCCCCCTTGCTTTTATACGAGGAGCCCTTTGACGCCGTTGAATTGGACGCTTACGAC ATAAACGCATTTCTTTCGGTTGTTTTTCAGACGCCGGAAGGAGCCGAGACGGATGTTTTGCTTGAGCGGCTATGGCTCCT CGCCATGATTGACCGGGTATCCGGCGCCATACTCACCTATAGCATTGTATACAGTAGCGAGGTGTCAGCGAATGATGTCC TTACGTTGATCCGAGATGCAGTAGCAAGACCTTGGCGGCCCAAAGAACTGACAATACCTGGACTTTCCTACCCAGAGGGT GGCGGCCTTCCGAGCGGTGTCTTCCCAGAGTGTGAGGGAGCGGTATGGGGCAGCATTTTACTGGACGGCGCTTTGGCTCA TTTGGCGAAAGCGGTCTATGAGACTGCACGTAGGCACTTAGGCTTTATTGTGAATTGGGGACCTTCTCGACATTTTGAGA GGCGTCCAAATGTCGAACGGCTGTTCAAGAGCATTTCAGACGACGTCTTTTTACGATTCCCCTCTACTACGGGCTCCAAT CCTGGAAATGGTCGCGCTATTGGCGCCGAAAAAAACGCAACGCGATATCGCATTAGGTCTACAGAGGTTGAGGAGTTGCT CGACGTGTATGTGGCTCAATTCAATGCGACCCCATCGGAAGGACTGTCGTATAGATCCCCACTTGAGTACATCGAATATT TCCTCGCGGAGGGACATTTCATTGCTAGGCGACTTCCTCGTGTAAGCGAATCCGGAAACCCAATGCCTGTCAGGAAAGAG TGCACAGTTCGCGGAGGGGCGAAAAGTGGTCGACGCCCCTACATTGAACTAGACCGAGCGAGATATACGAGTTCTGTATT AGCGCAGCTGCTAGTTTTGGTTGGAAAAAAAATTGTCATAGAGATTGACGATGAGGATTTAAGACAGGTAAAGGCCTATT TACCTAGTGGCGCCGAGCTAGGATTTCTCAAGGCCTCAGGCAGGTGGGCAATCACAAAACACAGCCGGAAAACCCGCCAA GCAATTAATAGGCTCGTTCATAGACGGGCGCTAGTTGTTTCAGAGCTAGACGACCCCGTGCAGGCCTATATGAGGTATCT AGGGAGTCGGGAAAAAGCATCACCGGGTCGAAAGGTTCTCCCCAGTCAGAGTAAAGCCACTGAAGCAACGCGCGTGGCAC GCGAGAGCGGTTTACCTCTGGTTCTCGGTCCTCCGTACGAGGCGCGCCAAACCAGAGAAACTGTATCCTCTGAAGAAAGT GGAACTCTGATGGACAAACCGCCGCCGGATTTAAACGAACTTATTAATCGCCAGCGATAG
Upstream 100 bases:
>100_bases CCAGTAGTGCTGGGGATGATGGTCCGCATGGGTGTGGAGAATGTAATACATTTTGACTTGAGCCGACGCTCGTTTGGCCT TCAGACCGAGTGGAGTCTCA
Downstream 100 bases:
>100_bases CGCAGCCGACGGTCTATGGCTACATATAATCAGTTGCGTCACGTTGAATTGTCTGCAGAAGCTCGGGCGTCCATGCTGAG TCGTCATCCCATTGTCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MDKQQRWKRTESLMDTPAVDTWPTVDVASLRPEHQEKYAAKREAVRLYVQGYPTAAIFERTGVPAGALVHMAKRCTTIAE DGQIMGFRALIPYSHLKAYERKAEVKSKRQEQRGGHSGALGAVLSRYPEVEAKLISLIRKEAKSREIHEHRIRPKDLHRI FLSCLKNNGVSLGEWPFNTKHLGIRSIQTYMRTLLNTSFERAVNTRGEQEARAHLAVGRGIAPLLLYEEPFDAVELDAYD INAFLSVVFQTPEGAETDVLLERLWLLAMIDRVSGAILTYSIVYSSEVSANDVLTLIRDAVARPWRPKELTIPGLSYPEG GGLPSGVFPECEGAVWGSILLDGALAHLAKAVYETARRHLGFIVNWGPSRHFERRPNVERLFKSISDDVFLRFPSTTGSN PGNGRAIGAEKNATRYRIRSTEVEELLDVYVAQFNATPSEGLSYRSPLEYIEYFLAEGHFIARRLPRVSESGNPMPVRKE CTVRGGAKSGRRPYIELDRARYTSSVLAQLLVLVGKKIVIEIDDEDLRQVKAYLPSGAELGFLKASGRWAITKHSRKTRQ AINRLVHRRALVVSELDDPVQAYMRYLGSREKASPGRKVLPSQSKATEATRVARESGLPLVLGPPYEARQTRETVSSEES GTLMDKPPPDLNELINRQR
Sequences:
>Translated_659_residues MDKQQRWKRTESLMDTPAVDTWPTVDVASLRPEHQEKYAAKREAVRLYVQGYPTAAIFERTGVPAGALVHMAKRCTTIAE DGQIMGFRALIPYSHLKAYERKAEVKSKRQEQRGGHSGALGAVLSRYPEVEAKLISLIRKEAKSREIHEHRIRPKDLHRI FLSCLKNNGVSLGEWPFNTKHLGIRSIQTYMRTLLNTSFERAVNTRGEQEARAHLAVGRGIAPLLLYEEPFDAVELDAYD INAFLSVVFQTPEGAETDVLLERLWLLAMIDRVSGAILTYSIVYSSEVSANDVLTLIRDAVARPWRPKELTIPGLSYPEG GGLPSGVFPECEGAVWGSILLDGALAHLAKAVYETARRHLGFIVNWGPSRHFERRPNVERLFKSISDDVFLRFPSTTGSN PGNGRAIGAEKNATRYRIRSTEVEELLDVYVAQFNATPSEGLSYRSPLEYIEYFLAEGHFIARRLPRVSESGNPMPVRKE CTVRGGAKSGRRPYIELDRARYTSSVLAQLLVLVGKKIVIEIDDEDLRQVKAYLPSGAELGFLKASGRWAITKHSRKTRQ AINRLVHRRALVVSELDDPVQAYMRYLGSREKASPGRKVLPSQSKATEATRVARESGLPLVLGPPYEARQTRETVSSEES GTLMDKPPPDLNELINRQR >Mature_659_residues MDKQQRWKRTESLMDTPAVDTWPTVDVASLRPEHQEKYAAKREAVRLYVQGYPTAAIFERTGVPAGALVHMAKRCTTIAE DGQIMGFRALIPYSHLKAYERKAEVKSKRQEQRGGHSGALGAVLSRYPEVEAKLISLIRKEAKSREIHEHRIRPKDLHRI FLSCLKNNGVSLGEWPFNTKHLGIRSIQTYMRTLLNTSFERAVNTRGEQEARAHLAVGRGIAPLLLYEEPFDAVELDAYD INAFLSVVFQTPEGAETDVLLERLWLLAMIDRVSGAILTYSIVYSSEVSANDVLTLIRDAVARPWRPKELTIPGLSYPEG GGLPSGVFPECEGAVWGSILLDGALAHLAKAVYETARRHLGFIVNWGPSRHFERRPNVERLFKSISDDVFLRFPSTTGSN PGNGRAIGAEKNATRYRIRSTEVEELLDVYVAQFNATPSEGLSYRSPLEYIEYFLAEGHFIARRLPRVSESGNPMPVRKE CTVRGGAKSGRRPYIELDRARYTSSVLAQLLVLVGKKIVIEIDDEDLRQVKAYLPSGAELGFLKASGRWAITKHSRKTRQ AINRLVHRRALVVSELDDPVQAYMRYLGSREKASPGRKVLPSQSKATEATRVARESGLPLVLGPPYEARQTRETVSSEES GTLMDKPPPDLNELINRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73945; Mature: 73945
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQQRWKRTESLMDTPAVDTWPTVDVASLRPEHQEKYAAKREAVRLYVQGYPTAAIFER CCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHEEEEECCCCHHHHHH TGVPAGALVHMAKRCTTIAEDGQIMGFRALIPYSHLKAYERKAEVKSKRQEQRGGHSGAL CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH GAVLSRYPEVEAKLISLIRKEAKSREIHEHRIRPKDLHRIFLSCLKNNGVSLGEWPFNTK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC HLGIRSIQTYMRTLLNTSFERAVNTRGEQEARAHLAVGRGIAPLLLYEEPFDAVELDAYD CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHH INAFLSVVFQTPEGAETDVLLERLWLLAMIDRVSGAILTYSIVYSSEVSANDVLTLIRDA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCHHHHHHHHHHH VARPWRPKELTIPGLSYPEGGGLPSGVFPECEGAVWGSILLDGALAHLAKAVYETARRHL HHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GFIVNWGPSRHFERRPNVERLFKSISDDVFLRFPSTTGSNPGNGRAIGAEKNATRYRIRS CEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEECH TEVEELLDVYVAQFNATPSEGLSYRSPLEYIEYFLAEGHFIARRLPRVSESGNPMPVRKE HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC CTVRGGAKSGRRPYIELDRARYTSSVLAQLLVLVGKKIVIEIDDEDLRQVKAYLPSGAEL CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCE GFLKASGRWAITKHSRKTRQAINRLVHRRALVVSELDDPVQAYMRYLGSREKASPGRKVL EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC PSQSKATEATRVARESGLPLVLGPPYEARQTRETVSSEESGTLMDKPPPDLNELINRQR CCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MDKQQRWKRTESLMDTPAVDTWPTVDVASLRPEHQEKYAAKREAVRLYVQGYPTAAIFER CCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHEEEEECCCCHHHHHH TGVPAGALVHMAKRCTTIAEDGQIMGFRALIPYSHLKAYERKAEVKSKRQEQRGGHSGAL CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH GAVLSRYPEVEAKLISLIRKEAKSREIHEHRIRPKDLHRIFLSCLKNNGVSLGEWPFNTK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC HLGIRSIQTYMRTLLNTSFERAVNTRGEQEARAHLAVGRGIAPLLLYEEPFDAVELDAYD CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHH INAFLSVVFQTPEGAETDVLLERLWLLAMIDRVSGAILTYSIVYSSEVSANDVLTLIRDA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCHHHHHHHHHHH VARPWRPKELTIPGLSYPEGGGLPSGVFPECEGAVWGSILLDGALAHLAKAVYETARRHL HHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GFIVNWGPSRHFERRPNVERLFKSISDDVFLRFPSTTGSNPGNGRAIGAEKNATRYRIRS CEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEECH TEVEELLDVYVAQFNATPSEGLSYRSPLEYIEYFLAEGHFIARRLPRVSESGNPMPVRKE HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC CTVRGGAKSGRRPYIELDRARYTSSVLAQLLVLVGKKIVIEIDDEDLRQVKAYLPSGAEL CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCE GFLKASGRWAITKHSRKTRQAINRLVHRRALVVSELDDPVQAYMRYLGSREKASPGRKVL EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC PSQSKATEATRVARESGLPLVLGPPYEARQTRETVSSEESGTLMDKPPPDLNELINRQR CCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA