| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317315
Identifier: 74317315
GI number: 74317315
Start: 1369454
End: 1369990
Strand: Direct
Name: 74317315
Synonym: Tbd_1297
Alternate gene names: NA
Gene position: 1369454-1369990 (Clockwise)
Preceding gene: 74317314
Following gene: 74317316
Centisome position: 47.06
GC content: 70.58
Gene sequence:
>537_bases ATGCGTGAACTGAAGATCGATTTCGCAGACACCCGCCGCTTGCCGCGCAGCGTGACGCTCGCGCTGCTCGCGGTGTCGCT CGCGCTCGCTGCCACCGCCGTCGACGCCTACCGCGACGCGCGTGCTGCGCTCGACTACTGGCATGACGAAGTCGCGCAAC GCCAGGCCGCGAGCAGCCGGGCGGCGCGGACGCCGGCGCCGGCGCGCGGCGTGGACAAAGCCGCTGCGGCGGAGCTTGCG CAGGCCCACGAGATCGCCGCGCAGCTCGCGCTGCCATGGGATCCGCTGTTTCGCGCGGTCGAAGCGGCGACGCCTGCGGA CATCGCACTGCTCGGCGTCGAGCCGAACGCGCAGAAACGCAACCTCAGGCTGGTCGGGGAGGGCAAGGACATCCATGCGG TCCTCGGGTATGTGCGACAGCTCGAAGCGCAGCCGCTGCTTCGCGACGTCTATCTGCTCGACCACGGCACGTCCGACGCC GACCCGCAACGGCCGGCGCGTTTCGTCATCGAGGCGGCGTGGGGAAGCGGATCATGA
Upstream 100 bases:
>100_bases GCCGAGGACGAGCCGGTGCACGCGCTGACCGTCGCCGACGCCGCGCGCTTCGGCGCCGCCCGCCACCGCGCCCACGCGCT CTCGCTTTTCGGAGGCGACG
Downstream 100 bases:
>100_bases TGGCGGCGCTATCCCTGTTGCGCCGTGCCGAGCGCGCCATCGGCCGCAGCGGCCTTGGCGCGCTGCTCGTGCTTGCCGGC GCAGCGGCCTTCCACCTGCT
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA DPQRPARFVIEAAWGSGS
Sequences:
>Translated_178_residues MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA DPQRPARFVIEAAWGSGS >Mature_178_residues MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA DPQRPARFVIEAAWGSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19206; Mature: 19206
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSR CCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTPAPARGVDKAAAAELAQAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC NLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDADPQRPARFVIEAAWGSGS CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSR CCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTPAPARGVDKAAAAELAQAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC NLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDADPQRPARFVIEAAWGSGS CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA