| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317314
Identifier: 74317314
GI number: 74317314
Start: 1368616
End: 1369461
Strand: Direct
Name: 74317314
Synonym: Tbd_1296
Alternate gene names: NA
Gene position: 1368616-1369461 (Clockwise)
Preceding gene: 74317313
Following gene: 74317315
Centisome position: 47.03
GC content: 73.52
Gene sequence:
>846_bases GTGTCACTTTTGTCGCCTGACGCGCTCTACGTCGCCCTCGCGCCCGAGCACGTCGCCCTCCTGCACGTGCGCGGCGGCCT GCGCCCGCGCGTGCTCGCGCGCGAGTCGGTCGCCGTGGATGCCGCTTCGACCACGGGCGCGGCCGAAAACTGGCGCGCCA CCCTCGAGGCGATGCGCCACGCCATCGACGGCAAGCCCTTGCGCGGCGCGCGGACCCACGTCGTGCTCGCCAACGGCTTT GCGCGCTACCGGCTGGTGCCGTGGCGCAGCGGCCTGCGCGACCGCGAGGAAAAACAGGCGCTCGTCCGCCACGGCTTCGC GCGCGTCCACGGCGAACGCGTCGAGCGATGGGCGCTGCGCTGGAGCGAAGGCGGCGCTTCCGAACCGGCAGTCGCCTGCG CCATCGATCAAGGACTGCTCGCCGGGATCGAGGCGGTCGCCGCCGACGCAGGCCTGCGCCTGCTCTCGGTCCAGCCCTAC CTCGTCACCGCGTTCAACGCCTGGCGCAAGCAGCTGCGCGAGAACACGGCATGGCTCGTGCTCCCCGAGCGCACGCGCGT CTGCGTCGCGCTGTTCGAGAACGGCGTCTGGCGGCACGTCGCCGTGCGCGCGTTGTCCGGCCGGCTCGACGAGGCGCTGC CGGTCCTCCTCGATCAGGAAGCCTTCGCCGCGCAATTGCCAGGACTTGCGGCCCCCGTCTATGTCCACGCGCCCGCGGCC ATGGTGCCAGGGCCGCGTGCCGAGGACGAGCCGGTGCACGCGCTGACCGTCGCCGACGCCGCGCGCTTCGGCGCCGCCCG CCACCGCGCCCACGCGCTCTCGCTTTTCGGAGGCGACGATGCGTGA
Upstream 100 bases:
>100_bases CAACTGAAGGAGGCCGCACGCCGCAACGGCGTGCGCTTCCTGCGCGATGCCGCGCTCGAACTCGTGCGCAAAGGGCAGAG CACCTTACAGGAAATCAATC
Downstream 100 bases:
>100_bases ACTGAAGATCGATTTCGCAGACACCCGCCGCTTGCCGCGCAGCGTGACGCTCGCGCTGCTCGCGGTGTCGCTCGCGCTCG CTGCCACCGCCGTCGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSLLSPDALYVALAPEHVALLHVRGGLRPRVLARESVAVDAASTTGAAENWRATLEAMRHAIDGKPLRGARTHVVLANGF ARYRLVPWRSGLRDREEKQALVRHGFARVHGERVERWALRWSEGGASEPAVACAIDQGLLAGIEAVAADAGLRLLSVQPY LVTAFNAWRKQLRENTAWLVLPERTRVCVALFENGVWRHVAVRALSGRLDEALPVLLDQEAFAAQLPGLAAPVYVHAPAA MVPGPRAEDEPVHALTVADAARFGAARHRAHALSLFGGDDA
Sequences:
>Translated_281_residues MSLLSPDALYVALAPEHVALLHVRGGLRPRVLARESVAVDAASTTGAAENWRATLEAMRHAIDGKPLRGARTHVVLANGF ARYRLVPWRSGLRDREEKQALVRHGFARVHGERVERWALRWSEGGASEPAVACAIDQGLLAGIEAVAADAGLRLLSVQPY LVTAFNAWRKQLRENTAWLVLPERTRVCVALFENGVWRHVAVRALSGRLDEALPVLLDQEAFAAQLPGLAAPVYVHAPAA MVPGPRAEDEPVHALTVADAARFGAARHRAHALSLFGGDDA >Mature_280_residues SLLSPDALYVALAPEHVALLHVRGGLRPRVLARESVAVDAASTTGAAENWRATLEAMRHAIDGKPLRGARTHVVLANGFA RYRLVPWRSGLRDREEKQALVRHGFARVHGERVERWALRWSEGGASEPAVACAIDQGLLAGIEAVAADAGLRLLSVQPYL VTAFNAWRKQLRENTAWLVLPERTRVCVALFENGVWRHVAVRALSGRLDEALPVLLDQEAFAAQLPGLAAPVYVHAPAAM VPGPRAEDEPVHALTVADAARFGAARHRAHALSLFGGDDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30405; Mature: 30274
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSPDALYVALAPEHVALLHVRGGLRPRVLARESVAVDAASTTGAAENWRATLEAMRH CCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEHHHHEEECCCCCCCHHHHHHHHHHHHH AIDGKPLRGARTHVVLANGFARYRLVPWRSGLRDREEKQALVRHGFARVHGERVERWALR HHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE WSEGGASEPAVACAIDQGLLAGIEAVAADAGLRLLSVQPYLVTAFNAWRKQLRENTAWLV ECCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEE LPERTRVCVALFENGVWRHVAVRALSGRLDEALPVLLDQEAFAAQLPGLAAPVYVHAPAA ECCCCCEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCC MVPGPRAEDEPVHALTVADAARFGAARHRAHALSLFGGDDA CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCCC >Mature Secondary Structure SLLSPDALYVALAPEHVALLHVRGGLRPRVLARESVAVDAASTTGAAENWRATLEAMRH CCCCCCEEEEEECCCEEEEEEECCCCCCCEEEHHHHEEECCCCCCCHHHHHHHHHHHHH AIDGKPLRGARTHVVLANGFARYRLVPWRSGLRDREEKQALVRHGFARVHGERVERWALR HHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE WSEGGASEPAVACAIDQGLLAGIEAVAADAGLRLLSVQPYLVTAFNAWRKQLRENTAWLV ECCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEE LPERTRVCVALFENGVWRHVAVRALSGRLDEALPVLLDQEAFAAQLPGLAAPVYVHAPAA ECCCCCEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCC MVPGPRAEDEPVHALTVADAARFGAARHRAHALSLFGGDDA CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA