| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yhhP [C]
Identifier: 74317272
GI number: 74317272
Start: 1317442
End: 1317675
Strand: Reverse
Name: yhhP [C]
Synonym: Tbd_1254
Alternate gene names: 74317272
Gene position: 1317675-1317442 (Counterclockwise)
Preceding gene: 74317273
Following gene: 74317271
Centisome position: 45.28
GC content: 62.39
Gene sequence:
>234_bases ATGAGCACGACCGCTACCCAGACGCTCGACGCACGCGGCATGAACTGCCCGCTTCCCATCCTGCGCACGAAGAAGGCCCT GGCTTCGCTTGCCAAGGGCGACACGCTCGCGGTCACGGCGACCGACCCGGGCTCGCTCAAGGACATGCAGGCCTTCTGCA AGCAGACTGGCAACGAACTGGTTTCGTCGAGTGCGAACCAAGGCGAGTTCGCGTTCGTGATTCGCAAATCCTAA
Upstream 100 bases:
>100_bases CGCTGCCAGTTTCAACAGCGGCGCCCTGCACTTTTCGCCCGGCAAATTTTTTTGCCGATTGCCTTGACCGAACGGTCATC TACCAGAGGAGGTTTTACCC
Downstream 100 bases:
>100_bases GGAGACGGCCATGGGCGCACCTGAAAACACCCTCGCCGGGCATCTCGACCCCGCCCGGCTCGACGAGTGGTTCGACCAGC GTTTCGAGGCCAGGATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSTTATQTLDARGMNCPLPILRTKKALASLAKGDTLAVTATDPGSLKDMQAFCKQTGNELVSSSANQGEFAFVIRKS
Sequences:
>Translated_77_residues MSTTATQTLDARGMNCPLPILRTKKALASLAKGDTLAVTATDPGSLKDMQAFCKQTGNELVSSSANQGEFAFVIRKS >Mature_76_residues STTATQTLDARGMNCPLPILRTKKALASLAKGDTLAVTATDPGSLKDMQAFCKQTGNELVSSSANQGEFAFVIRKS
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8106; Mature: 7975
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTATQTLDARGMNCPLPILRTKKALASLAKGDTLAVTATDPGSLKDMQAFCKQTGNEL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH VSSSANQGEFAFVIRKS HHCCCCCCCEEEEEECC >Mature Secondary Structure STTATQTLDARGMNCPLPILRTKKALASLAKGDTLAVTATDPGSLKDMQAFCKQTGNEL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH VSSSANQGEFAFVIRKS HHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]