| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317271
Identifier: 74317271
GI number: 74317271
Start: 1316820
End: 1317431
Strand: Reverse
Name: 74317271
Synonym: Tbd_1253
Alternate gene names: NA
Gene position: 1317431-1316820 (Counterclockwise)
Preceding gene: 74317272
Following gene: 74317253
Centisome position: 45.28
GC content: 62.91
Gene sequence:
>612_bases ATGGGCGCACCTGAAAACACCCTCGCCGGGCATCTCGACCCCGCCCGGCTCGACGAGTGGTTCGACCAGCGTTTCGAGGC CAGGATGGCTGAACGCGAAGCCGCACACGTGCCGTCGCTCGCGATCATCGCGACCAAGGGCACGCTCGACTGGGCCTACC CGCCCTTCATTCTTGCGTCGACAGCCGGCGCGCTGGGCTGGGACGTGTCGGTGTTCTTCACCTTCTACGGTCTCGAACTG CTGAAGAAGGACCTGAAGCTCGCAATCAGCCCGCTCGGCAACCCGAGCATGCCGATGAAGATGCCATTCGGGCCGCAGTG GCTCAAGGACATCAACTGGCATGTCCCCAACCTCGTGATGGCGGGCGTACCCGGCTTCGAGAAAGTCGCGACCGGCCTCA TGCAACAGACGGTGAAAAACAAGGGCGTCGCCAGCATCGACGACTTGCGCAGCGCCTGCCTTGAGGCCGAGGCCAAGCTC TATGCGTGCCAGATGACGGTCGACCTGTTCGGCTATTCGCAGGACGCGTTCATTCCCGAGATCGAGGGCTGGATCGGCGC GGCGAGTTTCCTGTCGATCGCGCAGAAGTCGGACGTCAACCTCTTCATCTGA
Upstream 100 bases:
>100_bases ATGCAGGCCTTCTGCAAGCAGACTGGCAACGAACTGGTTTCGTCGAGTGCGAACCAAGGCGAGTTCGCGTTCGTGATTCG CAAATCCTAAGGAGACGGCC
Downstream 100 bases:
>100_bases ACCCGGCCGCGGCCGGTTTGCCGGGCCGCGCCGTCTCAGGCACGCGGCCCGAAGATGACGTCGGCGACGTCGCGATAACG CTTGGCGAAATGCACGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MGAPENTLAGHLDPARLDEWFDQRFEARMAEREAAHVPSLAIIATKGTLDWAYPPFILASTAGALGWDVSVFFTFYGLEL LKKDLKLAISPLGNPSMPMKMPFGPQWLKDINWHVPNLVMAGVPGFEKVATGLMQQTVKNKGVASIDDLRSACLEAEAKL YACQMTVDLFGYSQDAFIPEIEGWIGAASFLSIAQKSDVNLFI
Sequences:
>Translated_203_residues MGAPENTLAGHLDPARLDEWFDQRFEARMAEREAAHVPSLAIIATKGTLDWAYPPFILASTAGALGWDVSVFFTFYGLEL LKKDLKLAISPLGNPSMPMKMPFGPQWLKDINWHVPNLVMAGVPGFEKVATGLMQQTVKNKGVASIDDLRSACLEAEAKL YACQMTVDLFGYSQDAFIPEIEGWIGAASFLSIAQKSDVNLFI >Mature_202_residues GAPENTLAGHLDPARLDEWFDQRFEARMAEREAAHVPSLAIIATKGTLDWAYPPFILASTAGALGWDVSVFFTFYGLELL KKDLKLAISPLGNPSMPMKMPFGPQWLKDINWHVPNLVMAGVPGFEKVATGLMQQTVKNKGVASIDDLRSACLEAEAKLY ACQMTVDLFGYSQDAFIPEIEGWIGAASFLSIAQKSDVNLFI
Specific function: Unknown
COG id: COG2210
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22282; Mature: 22151
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPENTLAGHLDPARLDEWFDQRFEARMAEREAAHVPSLAIIATKGTLDWAYPPFILAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH TAGALGWDVSVFFTFYGLELLKKDLKLAISPLGNPSMPMKMPFGPQWLKDINWHVPNLVM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEE AGVPGFEKVATGLMQQTVKNKGVASIDDLRSACLEAEAKLYACQMTVDLFGYSQDAFIPE ECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCH IEGWIGAASFLSIAQKSDVNLFI HHHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure GAPENTLAGHLDPARLDEWFDQRFEARMAEREAAHVPSLAIIATKGTLDWAYPPFILAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH TAGALGWDVSVFFTFYGLELLKKDLKLAISPLGNPSMPMKMPFGPQWLKDINWHVPNLVM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEE AGVPGFEKVATGLMQQTVKNKGVASIDDLRSACLEAEAKLYACQMTVDLFGYSQDAFIPE ECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCH IEGWIGAASFLSIAQKSDVNLFI HHHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA