| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317249
Identifier: 74317249
GI number: 74317249
Start: 1290345
End: 1290818
Strand: Reverse
Name: 74317249
Synonym: Tbd_1231
Alternate gene names: NA
Gene position: 1290818-1290345 (Counterclockwise)
Preceding gene: 74317253
Following gene: 74317248
Centisome position: 44.36
GC content: 63.5
Gene sequence:
>474_bases TTGAGGACGATTGGTGCCGCGACCTGTCGAGGCGACCGAGGCTCGCGCCGCGTCATGGTTCGAGCCGGCTACGCGGGTTC GCCCCAAACGGTCGTAAAGGGTTGTAGCTTCTACAACGAGGGCGGCGCGGACGTGCGCGATCGCGCGAAACGCGCTGTGC GGCTTGGGGAAGGGAAAATCGCTGGCGCCTGCGCGCCGCAGATCAGGTTCAGAAAAGCGGGCGTGCCGAACTACCATCCG AGCCCGCTTCGCCGGTGCGTTCCCCGGCTCGACGCTCGCCGAGGGGGCCCGGCCTCGCTGCGAAGTCCTCGCTCCGACCC GTGGCAACGGGGCGTCCGGACGAAGTACAGCAGCGCAACACTTTTATCCATCGGCATCTTCAAGAATCTCTCACATCGCT CCCTGCTTTATAGGATGTTCTGCGATTCAGTCGCCATTAGACACCCGATCTTTGCCGCGTGGAACAGGCGATAA
Upstream 100 bases:
>100_bases AACAAGCTCATGACGTACTCCTGCTCGTTGATCGATGATGCGCTGACTCGAAACTCGCAACGATCGTGCCATACCCAATA GCGGCAACGATTCGACCGGG
Downstream 100 bases:
>100_bases AAACAATTGATCGCTGAGGCGCGACGCGCGCAAGGTCCGCGGAAAGGTCTCGCCGTCTAGCGACCGAGGCTCAGCGCACG AAGTTCAACGGCACCTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR
Sequences:
>Translated_157_residues MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR >Mature_157_residues MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17414; Mature: 17414
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKI CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC AGACAPQIRFRKAGVPNYHPSPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSAT CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCH LLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKI CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC AGACAPQIRFRKAGVPNYHPSPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSAT CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCH LLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA