| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317226
Identifier: 74317226
GI number: 74317226
Start: 1265442
End: 1265864
Strand: Reverse
Name: 74317226
Synonym: Tbd_1208
Alternate gene names: NA
Gene position: 1265864-1265442 (Counterclockwise)
Preceding gene: 74317228
Following gene: 74317225
Centisome position: 43.5
GC content: 56.5
Gene sequence:
>423_bases GTGCCTAACTCTGCGGTCAAGGCCGACCCGCCGCAAGCGGCTTTCTTTGTGTACGGAAACGCGCTTGGCTATCTCAATGA GATCATCGTTTCCCCGGATCGCCGGTTGGCTGTCGGTGCCGTCCTGTTGCAGGGGTTTATCGCCGCTGTTCTTGTGTCTG CTCTGCTATGTTTTCCCCTGGCAAAGGTGTTTCGTCGGCATTCCCCTTACGCAGCCCTAGCGATCAGTTTGCCGGTTTTA CTGTTGCGTACCCCGGAGTTGCTGGATCCATCACGCAATGTCTTGGCTTTGCTGATCTCTGCGTACGAGATCTTGGCTTA TGCCGTTTTGCTGGTCCTGGGGACTCGTTTGGCACACAAGCAGCTTACCCCTAACGCTCCCCTCCATCGGGGCGCCCTGC GCTTTCACGTTAGAGGTCAATAG
Upstream 100 bases:
>100_bases TGCCTCGCTGTCATGACAACCTTTGAACATTAAGCAGGCGGCATAGGGGTGGTATTCGTCGCCAAGCACGCGCATTCCAC ATTCTGCGCACGGGTAAGCA
Downstream 100 bases:
>100_bases CAAATGCTAGGCGCAGTGTTTAACGTCCTCTTCGAAGTGATCGCTTTTCATCTGGGACGGTTTTATCTATTGACGCTGAC GCTTCGCCGTTTTGATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPNSAVKADPPQAAFFVYGNALGYLNEIIVSPDRRLAVGAVLLQGFIAAVLVSALLCFPLAKVFRRHSPYAALAISLPVL LLRTPELLDPSRNVLALLISAYEILAYAVLLVLGTRLAHKQLTPNAPLHRGALRFHVRGQ
Sequences:
>Translated_140_residues MPNSAVKADPPQAAFFVYGNALGYLNEIIVSPDRRLAVGAVLLQGFIAAVLVSALLCFPLAKVFRRHSPYAALAISLPVL LLRTPELLDPSRNVLALLISAYEILAYAVLLVLGTRLAHKQLTPNAPLHRGALRFHVRGQ >Mature_139_residues PNSAVKADPPQAAFFVYGNALGYLNEIIVSPDRRLAVGAVLLQGFIAAVLVSALLCFPLAKVFRRHSPYAALAISLPVLL LRTPELLDPSRNVLALLISAYEILAYAVLLVLGTRLAHKQLTPNAPLHRGALRFHVRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15158; Mature: 15027
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSAVKADPPQAAFFVYGNALGYLNEIIVSPDRRLAVGAVLLQGFIAAVLVSALLCFPL CCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKVFRRHSPYAALAISLPVLLLRTPELLDPSRNVLALLISAYEILAYAVLLVLGTRLAHK HHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTPNAPLHRGALRFHVRGQ CCCCCCCCCCCEEEEEECCC >Mature Secondary Structure PNSAVKADPPQAAFFVYGNALGYLNEIIVSPDRRLAVGAVLLQGFIAAVLVSALLCFPL CCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKVFRRHSPYAALAISLPVLLLRTPELLDPSRNVLALLISAYEILAYAVLLVLGTRLAHK HHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTPNAPLHRGALRFHVRGQ CCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA