| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317228
Identifier: 74317228
GI number: 74317228
Start: 1266331
End: 1266798
Strand: Reverse
Name: 74317228
Synonym: Tbd_1210
Alternate gene names: NA
Gene position: 1266798-1266331 (Counterclockwise)
Preceding gene: 74317229
Following gene: 74317226
Centisome position: 43.54
GC content: 53.42
Gene sequence:
>468_bases ATGATACAGACCGCCATAATTTCGGACTGCCAGCAATATCGCTACGAGTTGCGGCGTGTATGGGATGACACTAAACCGCT TGCGCTATTCATCGGCCTGAATCCCTCTACCGCAGATGCGGAAACGGATGACAACACTTCTCGCGTATGTATCAATTACG CAAAGCGCTGGGGCTATGGGGGCTTGTTGCTTGGAAACCTATTCGCCTTCCGTTCTACCGATCAGTCAGCTTTGTACACT GCTTCTGATCCCGTTGGCTCCGATAATGATGCTTGGCTTCGGAGGCTTCAAGCAGAAGCAGCGATAGTCATTTGTGCGTG GAGTGCGACAGGTAGCTACCGCAACCGAGACAAGGCCGTTCTTGGGTTCCTCCACAACCCCCACTGCCTCACCAAGCTGA AAAGCGGCTATCCAGGTCATCCGCTGTATAAGAGCGCAGACCTCCAGCCGGTGCCATATGAGCGCTAA
Upstream 100 bases:
>100_bases TAAATGTCAGTGGTGTGGGTCAACTTCAGTTGGGAGTGGCTGCCCTCACAGTCCTACAGGGAAACATGAAAAATAAGCAC TAAAAAATCACAGGAGCATC
Downstream 100 bases:
>100_bases CAATTCATTCCACCGGACCTGCGCGAAAAGCCGCGCAGGCCGGTGAATTCAAACGTTAGGCCGCATCAAGAATCTCTTTT TCCACGATGCGAAGAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIQTAIISDCQQYRYELRRVWDDTKPLALFIGLNPSTADAETDDNTSRVCINYAKRWGYGGLLLGNLFAFRSTDQSALYT ASDPVGSDNDAWLRRLQAEAAIVICAWSATGSYRNRDKAVLGFLHNPHCLTKLKSGYPGHPLYKSADLQPVPYER
Sequences:
>Translated_155_residues MIQTAIISDCQQYRYELRRVWDDTKPLALFIGLNPSTADAETDDNTSRVCINYAKRWGYGGLLLGNLFAFRSTDQSALYT ASDPVGSDNDAWLRRLQAEAAIVICAWSATGSYRNRDKAVLGFLHNPHCLTKLKSGYPGHPLYKSADLQPVPYER >Mature_155_residues MIQTAIISDCQQYRYELRRVWDDTKPLALFIGLNPSTADAETDDNTSRVCINYAKRWGYGGLLLGNLFAFRSTDQSALYT ASDPVGSDNDAWLRRLQAEAAIVICAWSATGSYRNRDKAVLGFLHNPHCLTKLKSGYPGHPLYKSADLQPVPYER
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17391; Mature: 17391
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTAIISDCQQYRYELRRVWDDTKPLALFIGLNPSTADAETDDNTSRVCINYAKRWGYG CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC GLLLGNLFAFRSTDQSALYTASDPVGSDNDAWLRRLQAEAAIVICAWSATGSYRNRDKAV CCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCEE LGFLHNPHCLTKLKSGYPGHPLYKSADLQPVPYER EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQTAIISDCQQYRYELRRVWDDTKPLALFIGLNPSTADAETDDNTSRVCINYAKRWGYG CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC GLLLGNLFAFRSTDQSALYTASDPVGSDNDAWLRRLQAEAAIVICAWSATGSYRNRDKAV CCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCEE LGFLHNPHCLTKLKSGYPGHPLYKSADLQPVPYER EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA