Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is phnB [H]

Identifier: 74317222

GI number: 74317222

Start: 1263407

End: 1263844

Strand: Reverse

Name: phnB [H]

Synonym: Tbd_1204

Alternate gene names: 74317222

Gene position: 1263844-1263407 (Counterclockwise)

Preceding gene: 74317223

Following gene: 74317221

Centisome position: 43.43

GC content: 64.38

Gene sequence:

>438_bases
ATGGCACGCGTCAGCCCCTATCTGAATTTTGCACGCTCAACCGAAGGCGCATTCCTGTTTTACAAATCGGTTTTCGGGAC
CGATTTCATCGGGCCGATCGGCCGTTGGCGGGACATGCCGCCTGACCCGGCAACCGCCCCGCTTCCGGACGCCGACCTCG
ATCTTGTCATCCACGTCGAGCTGCCGATTCTGGGCGGCCACGTGCTGATGGGCACCGATGCGCCGTCCTCGGCCGGGTTC
AGCGTCACGCCGGGCAATAACGTACACATCCTGCTCGAGCCCGAGACACGGGCCGAGACCGATCGCCTGTTCGCGGCGCT
CGCCGAAGGCGGCCAGGTCGAGATGCCGTTGCAGGAGATGTTCTGGGGCGGCTATTACGGCAGCCTCGCCGACCGCTTCG
GCGTGCGCTGGATGTTCAATTGCGCGGAGCAGCACTGA

Upstream 100 bases:

>100_bases
GCACGGGGGCTGAACCCATCGGGGCCTTCACCCGGACAAGAGGGATTCAAGGCGAGGTGCTATAGAGAACAGGATCGACG
GTCTCTGGCAGGAGGACAGC

Downstream 100 bases:

>100_bases
GGCGCCGCGCCGGACAATGGCTATCCGCATCGTACGCCTGGGCAGTGCGCGGACAGCCGGCGAAGGGCTGCGAGTCGGTG
CGGTCAGGCGGCCGCCGCGC

Product: PhnB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MARVSPYLNFARSTEGAFLFYKSVFGTDFIGPIGRWRDMPPDPATAPLPDADLDLVIHVELPILGGHVLMGTDAPSSAGF
SVTPGNNVHILLEPETRAETDRLFAALAEGGQVEMPLQEMFWGGYYGSLADRFGVRWMFNCAEQH

Sequences:

>Translated_145_residues
MARVSPYLNFARSTEGAFLFYKSVFGTDFIGPIGRWRDMPPDPATAPLPDADLDLVIHVELPILGGHVLMGTDAPSSAGF
SVTPGNNVHILLEPETRAETDRLFAALAEGGQVEMPLQEMFWGGYYGSLADRFGVRWMFNCAEQH
>Mature_144_residues
ARVSPYLNFARSTEGAFLFYKSVFGTDFIGPIGRWRDMPPDPATAPLPDADLDLVIHVELPILGGHVLMGTDAPSSAGFS
VTPGNNVHILLEPETRAETDRLFAALAEGGQVEMPLQEMFWGGYYGSLADRFGVRWMFNCAEQH

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790546, Length=151, Percent_Identity=29.8013245033113, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15932; Mature: 15801

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVSPYLNFARSTEGAFLFYKSVFGTDFIGPIGRWRDMPPDPATAPLPDADLDLVIHVE
CCCCCCHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
LPILGGHVLMGTDAPSSAGFSVTPGNNVHILLEPETRAETDRLFAALAEGGQVEMPLQEM
CCEECCEEEEECCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCHHHH
FWGGYYGSLADRFGVRWMFNCAEQH
HCCCCCHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure 
ARVSPYLNFARSTEGAFLFYKSVFGTDFIGPIGRWRDMPPDPATAPLPDADLDLVIHVE
CCCCCHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
LPILGGHVLMGTDAPSSAGFSVTPGNNVHILLEPETRAETDRLFAALAEGGQVEMPLQEM
CCEECCEEEEECCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCHHHH
FWGGYYGSLADRFGVRWMFNCAEQH
HCCCCCHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]