| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317221
Identifier: 74317221
GI number: 74317221
Start: 1263004
End: 1263390
Strand: Reverse
Name: 74317221
Synonym: Tbd_1203
Alternate gene names: NA
Gene position: 1263390-1263004 (Counterclockwise)
Preceding gene: 74317222
Following gene: 74317220
Centisome position: 43.42
GC content: 65.89
Gene sequence:
>387_bases ATGGCTATCCGCATCGTACGCCTGGGCAGTGCGCGGACAGCCGGCGAAGGGCTGCGAGTCGGTGCGGTCAGGCGGCCGCC GCGCGGGGTGCGGAAGGCGGACTACGCGTCGAAAAACTTCTACGACGTCTGGTTTCCGAACCTGGCGCCGAGCGAAGCGC TGTTGCACGAGGCCTTCCCGATCGCCGACGACAAGACCTGGCGGACGTTCCGACGACGGTTTCTCGCCGAAATGAAATCG CCGGCGGCGAAGCACGATCTCGACCTGCTCGCGGCGCTCTCGCGGACTGCCGATTTTTCCATCGGGTGTTATTGCGAGGA CGAGAGCCGCTGTCACCGCTCGATCCTGAGGGAGCTGCTCGAAAAGCGCGGGGCGGCGCTCGAGTGA
Upstream 100 bases:
>100_bases GAGATGTTCTGGGGCGGCTATTACGGCAGCCTCGCCGACCGCTTCGGCGTGCGCTGGATGTTCAATTGCGCGGAGCAGCA CTGAGGCGCCGCGCCGGACA
Downstream 100 bases:
>100_bases GCATGGCGGCAATTGCTTCGTGACGGCAACGCGCCGAGGCCGGCCCGCAAAACGGGGCCGCCCGCCACGGCCGGCACCCG TCGCCGCCGCCGGGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MAIRIVRLGSARTAGEGLRVGAVRRPPRGVRKADYASKNFYDVWFPNLAPSEALLHEAFPIADDKTWRTFRRRFLAEMKS PAAKHDLDLLAALSRTADFSIGCYCEDESRCHRSILRELLEKRGAALE
Sequences:
>Translated_128_residues MAIRIVRLGSARTAGEGLRVGAVRRPPRGVRKADYASKNFYDVWFPNLAPSEALLHEAFPIADDKTWRTFRRRFLAEMKS PAAKHDLDLLAALSRTADFSIGCYCEDESRCHRSILRELLEKRGAALE >Mature_127_residues AIRIVRLGSARTAGEGLRVGAVRRPPRGVRKADYASKNFYDVWFPNLAPSEALLHEAFPIADDKTWRTFRRRFLAEMKSP AAKHDLDLLAALSRTADFSIGCYCEDESRCHRSILRELLEKRGAALE
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14490; Mature: 14359
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRIVRLGSARTAGEGLRVGAVRRPPRGVRKADYASKNFYDVWFPNLAPSEALLHEAFP CEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCC IADDKTWRTFRRRFLAEMKSPAAKHDLDLLAALSRTADFSIGCYCEDESRCHRSILRELL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH EKRGAALE HHCCCCCC >Mature Secondary Structure AIRIVRLGSARTAGEGLRVGAVRRPPRGVRKADYASKNFYDVWFPNLAPSEALLHEAFP EEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCC IADDKTWRTFRRRFLAEMKSPAAKHDLDLLAALSRTADFSIGCYCEDESRCHRSILRELL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH EKRGAALE HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA