The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is ygfY [C]

Identifier: 74317204

GI number: 74317204

Start: 1245616

End: 1245930

Strand: Direct

Name: ygfY [C]

Synonym: Tbd_1186

Alternate gene names: 74317204

Gene position: 1245616-1245930 (Clockwise)

Preceding gene: 74317203

Following gene: 74317205

Centisome position: 42.81

GC content: 64.76

Gene sequence:

>315_bases
GTGTCTGAGTCACGGCCGGCGGTGGATGATGCCGAAGGCGCAGGGGGAAATTTTCCCGACGACGCGGGCAACCTGCAAAG
CGCCCGGATCGCCTGGCGCTGCCGTCGCGGCCTGCTCGAGCTGGATCTCTGGCTGGGTGGCTTTTGGGCCGCGCAGCGCG
CTACACTTCGGTCTCGTGAGACCGCCGCGTTCGTGCGCCTCCTGGCCTTGTCGGACATGGAAATCCTCGACAGGCTGCAC
GGCCGCTCGGCGCCGGACGATGCCGACGTCGACGCGCTCATTCAACGCCTGAAAAATTTTCGAGAAGCAAAATGA

Upstream 100 bases:

>100_bases
TATCGTTGCCGCGGCATCATGAACTGTGTCGACGTCTGCCCCAAGGGCCTCAACCCTGCGGGGGCGATCGCGCGGATCCG
CACGCTGCTGGCCAAACGCC

Downstream 100 bases:

>100_bases
AGAAAACCGTCACCCTCACTTTCAGCGACGGCAGTCCCGCGATTGAATTGCCGATCGAAGAGGGCACCTACGGCAAGCCC
GTGATCGACATCCGCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLH
GRSAPDDADVDALIQRLKNFREAK

Sequences:

>Translated_104_residues
MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLH
GRSAPDDADVDALIQRLKNFREAK
>Mature_103_residues
SESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLHG
RSAPDDADVDALIQRLKNFREAK

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11553; Mature: 11422

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAFVRLLALSDMEILDRLHGRSAPDDADVDALIQRLKNFREAK
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAFVRLLALSDMEILDRLHGRSAPDDADVDALIQRLKNFREAK
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA