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The map label for this gene is sdhD [C]

Identifier: 74317201

GI number: 74317201

Start: 1242729

End: 1243088

Strand: Direct

Name: sdhD [C]

Synonym: Tbd_1183

Alternate gene names: 74317201

Gene position: 1242729-1243088 (Clockwise)

Preceding gene: 74317200

Following gene: 74317202

Centisome position: 42.71

GC content: 71.67

Gene sequence:

>360_bases
ATGAAAGCCGCGACCGGCTCGCACACGGGGACCGGAACCTGGCTCGTGCAGCGCGCGACGGCGGTCGTGCTCGCGCTGGC
CCTGCCGCTCCTGCTGCTGCGCTTTCTCGCCGCGCCGCCGCTCGACTTCGCCGCCTGGCAGGCGCTGCTCGCGCCGCTCT
GGCTGCGTCTGCTGATGCTGCTCGCGGCCGGCGCGCTGGCCCTTCACGCCTGGGTCGGCGTGCGCGACATCCTGATGGAT
TACGTCCATGCGACCGGACTGCGCCTGACGATATATATGGCCGTGATCGGCACCCTGGCGACGAGTGTCGCGTGGCTCGC
CGCGATCCTGTTCGGCCCGGTCTTCGGGCGCGCGGCGTGA

Upstream 100 bases:

>100_bases
TGCACTGGGGCGAAGACCTCGCGTCGGCGCGCCGGAGCAGCCTCGCCGTGATGGTCGCGGCGGGGCTCGCGACGGGCCTC
GCCGCGTGGAGACTGTTCGG

Downstream 100 bases:

>100_bases
ACCGGCGCCGCTTCGACGCGCTGATCGTCGGCGGCGGCGGTGCCGGCCTGCGCGCCGCGCTGCAGCTTGCGCGCTCGGAC
CACAAGGTCGCCGTGGTGTC

Product: succinate dehydrogenase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKAATGSHTGTGTWLVQRATAVVLALALPLLLLRFLAAPPLDFAAWQALLAPLWLRLLMLLAAGALALHAWVGVRDILMD
YVHATGLRLTIYMAVIGTLATSVAWLAAILFGPVFGRAA

Sequences:

>Translated_119_residues
MKAATGSHTGTGTWLVQRATAVVLALALPLLLLRFLAAPPLDFAAWQALLAPLWLRLLMLLAAGALALHAWVGVRDILMD
YVHATGLRLTIYMAVIGTLATSVAWLAAILFGPVFGRAA
>Mature_119_residues
MKAATGSHTGTGTWLVQRATAVVLALALPLLLLRFLAAPPLDFAAWQALLAPLWLRLLMLLAAGALALHAWVGVRDILMD
YVHATGLRLTIYMAVIGTLATSVAWLAAILFGPVFGRAA

Specific function: This Is The Hydrophobic Component Of The Succinate Dehydrogenase Complex. It Is Suggested That It Is Required To Anchor The Catalytic Components To The Cytoplasmic Membrane. [C]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 12614; Mature: 12614

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAATGSHTGTGTWLVQRATAVVLALALPLLLLRFLAAPPLDFAAWQALLAPLWLRLLML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAGALALHAWVGVRDILMDYVHATGLRLTIYMAVIGTLATSVAWLAAILFGPVFGRAA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAATGSHTGTGTWLVQRATAVVLALALPLLLLRFLAAPPLDFAAWQALLAPLWLRLLML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAGALALHAWVGVRDILMDYVHATGLRLTIYMAVIGTLATSVAWLAAILFGPVFGRAA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA