| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nifP [H]
Identifier: 74317180
GI number: 74317180
Start: 1216621
End: 1217379
Strand: Direct
Name: nifP [H]
Synonym: Tbd_1162
Alternate gene names: 74317180
Gene position: 1216621-1217379 (Clockwise)
Preceding gene: 74317179
Following gene: 74317181
Centisome position: 41.81
GC content: 65.22
Gene sequence:
>759_bases ATGAGCCTGTTCAGCCAACTGAAGGAAGACATCGCGGTCGTCTTCGACCGCGATCCCGCGGCGCGCTCGACCTTCGAGGT GGTGACGACCTATCCCGGCTTTCATGCCGTTTTGATCCATCGCCTCGCGCACCGCCTGTGGCGCATGCAGTGGAAGTGGC TCGCGCGATTCACCTCGCACCTCGGCCGCTGGCTCACGGGCATCGAAATCCACCCCGGGGCGACGATCGGGCGGCGCGTC TTCATCGACCACGGGATGGGCGTGGTCGTCGGCGAGACCGCGGAAATCGGCGACGACTGCACCCTCTACCACGGCGTGAC GCTCGGCGGCACGTCCTGGAACAAGGGCAAGCGCCATCCGACCCTGATGAACGGGGTGGTCGTCGGCGCCGGCGCCAAGA TCCTCGGCCCGATCACCGTCGGGGCCAACGCGCGGGTGGGGTCGAATGCGGTCGTGGTCAAGGACGTGCCGGAGGATGCG ACCGCCGTCGGCATCCCCGCGCGGATCCTCGACAGCGCGGCGGAAAAGCAGCGCAACCGGCAAGCCGAAAAGCTCGGCTT CTCGGCGTACGCGATTTCGGCGGACATGAACGACCCGGTGGTCAAGGCGATCCACGGGCTGATCGATCATTCGGCGCATA TCGACCACCGGCTCGACCTGATTCTGGCCCAGCTCCAAAAGCTCGGCGTGGAGATGCCGGCGGGGCAGGACAAGCCCGAC GATTTCGACGCGAACTATTTGAACAAAATAGTTGACTAA
Upstream 100 bases:
>100_bases ATCCTCAGCGCGGCGCAGGACGCCAAGCGGGCCGCGCGCCGCAGCGGAACCGTCGGGCATAATAGTTGACTAAAATACTC GGAAATAGCATCCTCATCGC
Downstream 100 bases:
>100_bases ATTGCTAAGGTAAGGAATAGTTGACTGAAATGCTCGGGAATTTTATAGTTCGAGCGAAATTTCAGGAGAAAGAGACATGA GGTTGACGACCAAAGGTCGC
Product: serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSLFSQLKEDIAVVFDRDPAARSTFEVVTTYPGFHAVLIHRLAHRLWRMQWKWLARFTSHLGRWLTGIEIHPGATIGRRV FIDHGMGVVVGETAEIGDDCTLYHGVTLGGTSWNKGKRHPTLMNGVVVGAGAKILGPITVGANARVGSNAVVVKDVPEDA TAVGIPARILDSAAEKQRNRQAEKLGFSAYAISADMNDPVVKAIHGLIDHSAHIDHRLDLILAQLQKLGVEMPAGQDKPD DFDANYLNKIVD
Sequences:
>Translated_252_residues MSLFSQLKEDIAVVFDRDPAARSTFEVVTTYPGFHAVLIHRLAHRLWRMQWKWLARFTSHLGRWLTGIEIHPGATIGRRV FIDHGMGVVVGETAEIGDDCTLYHGVTLGGTSWNKGKRHPTLMNGVVVGAGAKILGPITVGANARVGSNAVVVKDVPEDA TAVGIPARILDSAAEKQRNRQAEKLGFSAYAISADMNDPVVKAIHGLIDHSAHIDHRLDLILAQLQKLGVEMPAGQDKPD DFDANYLNKIVD >Mature_251_residues SLFSQLKEDIAVVFDRDPAARSTFEVVTTYPGFHAVLIHRLAHRLWRMQWKWLARFTSHLGRWLTGIEIHPGATIGRRVF IDHGMGVVVGETAEIGDDCTLYHGVTLGGTSWNKGKRHPTLMNGVVVGAGAKILGPITVGANARVGSNAVVVKDVPEDAT AVGIPARILDSAAEKQRNRQAEKLGFSAYAISADMNDPVVKAIHGLIDHSAHIDHRLDLILAQLQKLGVEMPAGQDKPDD FDANYLNKIVD
Specific function: Probable serine acetyltransferase required for optimizing the expression of nitrogenase activity. May be required to boost rates of synthesis or intracellular concentrations of cysteine or methionine [H]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=161, Percent_Identity=44.7204968944099, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788371, Length=146, Percent_Identity=41.7808219178082, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 27479; Mature: 27348
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFSQLKEDIAVVFDRDPAARSTFEVVTTYPGFHAVLIHRLAHRLWRMQWKWLARFTSH CCHHHHHHHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRWLTGIEIHPGATIGRRVFIDHGMGVVVGETAEIGDDCTLYHGVTLGGTSWNKGKRHP HHHHHHCEEECCCCCCCCEEEEECCCEEEEECCHHCCCCEEEEECEEECCCCCCCCCCCC TLMNGVVVGAGAKILGPITVGANARVGSNAVVVKDVPEDATAVGIPARILDSAAEKQRNR HHHCCEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH QAEKLGFSAYAISADMNDPVVKAIHGLIDHSAHIDHRLDLILAQLQKLGVEMPAGQDKPD HHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DFDANYLNKIVD CCCHHHHHHHCC >Mature Secondary Structure SLFSQLKEDIAVVFDRDPAARSTFEVVTTYPGFHAVLIHRLAHRLWRMQWKWLARFTSH CHHHHHHHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRWLTGIEIHPGATIGRRVFIDHGMGVVVGETAEIGDDCTLYHGVTLGGTSWNKGKRHP HHHHHHCEEECCCCCCCCEEEEECCCEEEEECCHHCCCCEEEEECEEECCCCCCCCCCCC TLMNGVVVGAGAKILGPITVGANARVGSNAVVVKDVPEDATAVGIPARILDSAAEKQRNR HHHCCEEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH QAEKLGFSAYAISADMNDPVVKAIHGLIDHSAHIDHRLDLILAQLQKLGVEMPAGQDKPD HHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DFDANYLNKIVD CCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]