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The map label for this gene is omlA [H]

Identifier: 74317142

GI number: 74317142

Start: 1178945

End: 1179973

Strand: Direct

Name: omlA [H]

Synonym: Tbd_1124

Alternate gene names: 74317142

Gene position: 1178945-1179973 (Clockwise)

Preceding gene: 74317140

Following gene: 74317143

Centisome position: 40.52

GC content: 69.1

Gene sequence:

>1029_bases
ATGCCTCGTCTCCTGATCTCCGTTCTGCTTGTGGCCCTGGTCGCCGGCTGTTCGATCCCAAAGCTCGGCCCGCATCGCAT
CGACGTTCAGCAGGGCAACGCACTCGATCAGGAGAACGTCTCCCGCCTGAAGCCCGGCCTCAACCGCTCCCAGGTTCGTT
TCCTGCTCGGCACGCCGCTCGTCGTCGACCCGTTCCGTGGCGACCGCTGGGACTACGTGTACGTGTACTACAAGGCGGGC
AAACTCGCCGAGCAGAAGCGGATCACGCTCCATTTCGACGGCGATACGCTGGCGCGGATCGAGGGCGACGTGCCGCAGGA
GGTCGCCGAAGCTCAGGCACAGCAGGCGCCGCCCGCACCTGAGGCCGACGCGGCGCCGGCAGCCGCGAGCGTCACCGCGG
TCCAAGATCCTGCGTCTGCGTCTGCTCCGGAACCGGCCGCCGCGAACGTTGCTGAGCCCGCATCCGCACCCGCCGCGGCG
CCGACGCAGGTCTCCGGGGAGCGGACATCTGAAACGAGTGCGGTCGCGCCCCGCTCGAGCCCGGAAGACGCGCCGGCCTC
CGTCGACTCGCCTGCCGCAGCGGGCGCTCTGCGCAGGGACACCGACGTCGCGAAGATACACCCCGACGTCACGCCTGCAT
TCCCCGGAAGCGAGCAGGCCGCGCCGGTCGACGCGGCGCTGCTCAAGGCGCTTACCGAGTGGGCGGACGCCTGGTCTCGC
CGCGATTCCGAAGCGTATTTCGCCGCCTACGACGCCCACTTTGTTCCCGACGACGGCGCCAGCCGCGAGGCGTGGCGGCG
GCGCAAGCTGCAGGCGTTCGACGCGACGAAGGCGCTCGAGGTCAAGGTCGACGCGCCGGCGGCCGAGCGCACCGAAGAGG
GCGCGGTCGCCCTGACCTTCAAGCAATTTTTCCGCTCGGATACTTACCGCGACGCCGTGCTCAAGCGGCTGCTCATGGTC
GAACGCGATGGTCGCTGGCTGATCGTCGAAGAGAAAGTGCTGCAGACCCTCGAGCGAGGCCGCCCGTGA

Upstream 100 bases:

>100_bases
TTGAGGTCGGTCGGATTGCTCAACGAGGCTCCAGAACGGAAACGCGAATACGTTATGATACGTTTTTTTCACCCGCCTGG
GCCCTTCAGGCTTCCCGGTT

Downstream 100 bases:

>100_bases
GCGTGCGCGTCGCCATCGCAGGGGTGTCGGGTCGCATGGGCCGTGCCTTGCTCGAAGCCGTGGCCGCGGACGACGGCTGC
GCGCTCTACGCGGCGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPRLLISVLLVALVAGCSIPKLGPHRIDVQQGNALDQENVSRLKPGLNRSQVRFLLGTPLVVDPFRGDRWDYVYVYYKAG
KLAEQKRITLHFDGDTLARIEGDVPQEVAEAQAQQAPPAPEADAAPAAASVTAVQDPASASAPEPAAANVAEPASAPAAA
PTQVSGERTSETSAVAPRSSPEDAPASVDSPAAAGALRRDTDVAKIHPDVTPAFPGSEQAAPVDAALLKALTEWADAWSR
RDSEAYFAAYDAHFVPDDGASREAWRRRKLQAFDATKALEVKVDAPAAERTEEGAVALTFKQFFRSDTYRDAVLKRLLMV
ERDGRWLIVEEKVLQTLERGRP

Sequences:

>Translated_342_residues
MPRLLISVLLVALVAGCSIPKLGPHRIDVQQGNALDQENVSRLKPGLNRSQVRFLLGTPLVVDPFRGDRWDYVYVYYKAG
KLAEQKRITLHFDGDTLARIEGDVPQEVAEAQAQQAPPAPEADAAPAAASVTAVQDPASASAPEPAAANVAEPASAPAAA
PTQVSGERTSETSAVAPRSSPEDAPASVDSPAAAGALRRDTDVAKIHPDVTPAFPGSEQAAPVDAALLKALTEWADAWSR
RDSEAYFAAYDAHFVPDDGASREAWRRRKLQAFDATKALEVKVDAPAAERTEEGAVALTFKQFFRSDTYRDAVLKRLLMV
ERDGRWLIVEEKVLQTLERGRP
>Mature_341_residues
PRLLISVLLVALVAGCSIPKLGPHRIDVQQGNALDQENVSRLKPGLNRSQVRFLLGTPLVVDPFRGDRWDYVYVYYKAGK
LAEQKRITLHFDGDTLARIEGDVPQEVAEAQAQQAPPAPEADAAPAAASVTAVQDPASASAPEPAAANVAEPASAPAAAP
TQVSGERTSETSAVAPRSSPEDAPASVDSPAAAGALRRDTDVAKIHPDVTPAFPGSEQAAPVDAALLKALTEWADAWSRR
DSEAYFAAYDAHFVPDDGASREAWRRRKLQAFDATKALEVKVDAPAAERTEEGAVALTFKQFFRSDTYRDAVLKRLLMVE
RDGRWLIVEEKVLQTLERGRP

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=87, Percent_Identity=36.7816091954023, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 36833; Mature: 36702

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLLISVLLVALVAGCSIPKLGPHRIDVQQGNALDQENVSRLKPGLNRSQVRFLLGTPL
CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHEEEEECCCE
VVDPFRGDRWDYVYVYYKAGKLAEQKRITLHFDGDTLARIEGDVPQEVAEAQAQQAPPAP
EEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCC
EADAAPAAASVTAVQDPASASAPEPAAANVAEPASAPAAAPTQVSGERTSETSAVAPRSS
CCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEDAPASVDSPAAAGALRRDTDVAKIHPDVTPAFPGSEQAAPVDAALLKALTEWADAWSR
CCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
RDSEAYFAAYDAHFVPDDGASREAWRRRKLQAFDATKALEVKVDAPAAERTEEGAVALTF
CCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEH
KQFFRSDTYRDAVLKRLLMVERDGRWLIVEEKVLQTLERGRP
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCC
>Mature Secondary Structure 
PRLLISVLLVALVAGCSIPKLGPHRIDVQQGNALDQENVSRLKPGLNRSQVRFLLGTPL
HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHEEEEECCCE
VVDPFRGDRWDYVYVYYKAGKLAEQKRITLHFDGDTLARIEGDVPQEVAEAQAQQAPPAP
EEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCC
EADAAPAAASVTAVQDPASASAPEPAAANVAEPASAPAAAPTQVSGERTSETSAVAPRSS
CCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEDAPASVDSPAAAGALRRDTDVAKIHPDVTPAFPGSEQAAPVDAALLKALTEWADAWSR
CCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
RDSEAYFAAYDAHFVPDDGASREAWRRRKLQAFDATKALEVKVDAPAAERTEEGAVALTF
CCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEH
KQFFRSDTYRDAVLKRLLMVERDGRWLIVEEKVLQTLERGRP
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334; 10984043 [H]