| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is proB
Identifier: 74317138
GI number: 74317138
Start: 1175856
End: 1176980
Strand: Direct
Name: proB
Synonym: Tbd_1120
Alternate gene names: 74317138
Gene position: 1175856-1176980 (Clockwise)
Preceding gene: 74317137
Following gene: 74317139
Centisome position: 40.41
GC content: 70.04
Gene sequence:
>1125_bases GTGAGCACGTCGGTCGTCCGCCACGCACGGCGCATCGTCGTCAAGGTCGGTTCCAGCCTGGTCACGGCGGACGGGCGCGG CCTCGACCACGCGGCGCTGTCGCGCTGGGCCGAGCAGATCGCCGCGCTGGCCGAACAGGGCAAGGAAGTCGTGCTCGTGT CGTCGGGCGCGATCGCCGAGGGCATCGCGCGCCTCGGCTGGAAAAAGCGCCCGAAAGCGGTCAACGAGTTGCAGGCCGCG GCGGCGGTCGGGCAGATGGGTCTCGTGCAGGCCTACGAGTCGATTTTTCGCACCCACAAGTTGCATGCGGCCCAAGTTCT TCTGACCCACGAGGATCTCGCCGACCGCACGCGCTATCTCAACGCGCGCTCGACGCTACGCACGCTGCTTGAATTACGCG TGGTCCCGATCATCAACGAGAACGACACGGTGGCGACCGACGAGATCCGTCTCGGCGACAACGATACGCTGGGCGCGCTC GTGACCAATCTGATCGAAGCCGACTGCCTCGTCATCCTCACCGACCAGGCGGGGCTTTATACGGCCGATCCGCGCAAGGT CGCCGATGCGAGCCTCGTCATGGAGGCGCACGCCGGCGACCCCGAGCTCGAGCGCATGGCCGGCGGGGCCGGTAGCAGCG TCGGGACCGGCGGCATGCTGACCAAGATCCTCGCCGCCAAGCGCGCGGCGCGCAGCGGCGCGCACACCGTGATCTGCAGC GGCCGCGAGCCGCGCGTGCTGCTGCGTCTTGCCGAGGGCGAACCCATCGGCAGCCAGCTGGTCGCGCGCCAGGCGCCCCT CGCCGCGCGCCGCCAGTGGCTCGCCGATCACCTGCAACTGCGCGGCGGGCTCGTGCTCGACGACGGCGCCGTGCGCGCGC TGCAGGAGGACGGCAAGAGCCTCCTGCCGGTCGGCGTCCGGGGCGTGACCGGAGAATTCGAACGCGGCGAGGTCGTCGCC GTCGTCGACGCGAGCGGACGCGAGATCGCCCGCGGCCTGACCAACTACAGCGCCGCCGAAGCGCGCCGTATCGCGGGCAA GCCCAGTACCGCGATCGAAGCCGAGCTCGGCTACATGGACGAGCCCGAACTGATCCACCGCGACAACCTGGTCGTTCTGG CGTGA
Upstream 100 bases:
>100_bases TGTCCTACCATAAGGCCTTGTTCGAGGATCATTTCTGTCCCGACGGCATCAGCGTTCGCGATGCCAAGCAAGCCGTGCAG AGCCTGCGTCGGGCGTCGCG
Downstream 100 bases:
>100_bases CGACCGTGCTGGACTTCCTGCGGCACGGCGAACCCGTCGGCGGCCGCAAGTACCGCGGGCAGGTCGACGACGCGCTGTCC GAGTTGGGCTGGGCCCAGAT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSTSVVRHARRIVVKVGSSLVTADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAEGIARLGWKKRPKAVNELQAA AAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYLNARSTLRTLLELRVVPIINENDTVATDEIRLGDNDTLGAL VTNLIEADCLVILTDQAGLYTADPRKVADASLVMEAHAGDPELERMAGGAGSSVGTGGMLTKILAAKRAARSGAHTVICS GREPRVLLRLAEGEPIGSQLVARQAPLAARRQWLADHLQLRGGLVLDDGAVRALQEDGKSLLPVGVRGVTGEFERGEVVA VVDASGREIARGLTNYSAAEARRIAGKPSTAIEAELGYMDEPELIHRDNLVVLA
Sequences:
>Translated_374_residues MSTSVVRHARRIVVKVGSSLVTADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAEGIARLGWKKRPKAVNELQAA AAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYLNARSTLRTLLELRVVPIINENDTVATDEIRLGDNDTLGAL VTNLIEADCLVILTDQAGLYTADPRKVADASLVMEAHAGDPELERMAGGAGSSVGTGGMLTKILAAKRAARSGAHTVICS GREPRVLLRLAEGEPIGSQLVARQAPLAARRQWLADHLQLRGGLVLDDGAVRALQEDGKSLLPVGVRGVTGEFERGEVVA VVDASGREIARGLTNYSAAEARRIAGKPSTAIEAELGYMDEPELIHRDNLVVLA >Mature_373_residues STSVVRHARRIVVKVGSSLVTADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAEGIARLGWKKRPKAVNELQAAA AVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYLNARSTLRTLLELRVVPIINENDTVATDEIRLGDNDTLGALV TNLIEADCLVILTDQAGLYTADPRKVADASLVMEAHAGDPELERMAGGAGSSVGTGGMLTKILAAKRAARSGAHTVICSG REPRVLLRLAEGEPIGSQLVARQAPLAARRQWLADHLQLRGGLVLDDGAVRALQEDGKSLLPVGVRGVTGEFERGEVVAV VDASGREIARGLTNYSAAEARRIAGKPSTAIEAELGYMDEPELIHRDNLVVLA
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI21361368, Length=290, Percent_Identity=34.8275862068965, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI62912457, Length=288, Percent_Identity=35.0694444444444, Blast_Score=142, Evalue=4e-34, Organism=Escherichia coli, GI1786437, Length=363, Percent_Identity=44.0771349862259, Blast_Score=294, Evalue=7e-81, Organism=Caenorhabditis elegans, GI17569967, Length=272, Percent_Identity=33.8235294117647, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17569969, Length=272, Percent_Identity=33.8235294117647, Blast_Score=138, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320506, Length=416, Percent_Identity=35.3365384615385, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321822, Length=415, Percent_Identity=33.0120481927711, Blast_Score=189, Evalue=8e-49, Organism=Drosophila melanogaster, GI21357643, Length=287, Percent_Identity=33.7979094076655, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_THIDA (Q3SJS7)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314878.1 - ProteinModelPortal: Q3SJS7 - SMR: Q3SJS7 - STRING: Q3SJS7 - GeneID: 3673191 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1120 - NMPDR: fig|292415.3.peg.1120 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - PhylomeDB: Q3SJS7 - ProtClustDB: PRK05429 - BioCyc: TDEN292415:TBD_1120-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 39769; Mature: 39638
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSVVRHARRIVVKVGSSLVTADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAE CCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH GIARLGWKKRPKAVNELQAAAAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH NARSTLRTLLELRVVPIINENDTVATDEIRLGDNDTLGALVTNLIEADCLVILTDQAGLY HHHHHHHHHHHHHEEEEECCCCCEEECEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCE TADPRKVADASLVMEAHAGDPELERMAGGAGSSVGTGGMLTKILAAKRAARSGAHTVICS ECCCHHHHHHHHEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEC GREPRVLLRLAEGEPIGSQLVARQAPLAARRQWLADHLQLRGGLVLDDGAVRALQEDGKS CCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCC LLPVGVRGVTGEFERGEVVAVVDASGREIARGLTNYSAAEARRIAGKPSTAIEAELGYMD CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCC EPELIHRDNLVVLA CCCEEECCCEEEEC >Mature Secondary Structure STSVVRHARRIVVKVGSSLVTADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAE CHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH GIARLGWKKRPKAVNELQAAAAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH NARSTLRTLLELRVVPIINENDTVATDEIRLGDNDTLGALVTNLIEADCLVILTDQAGLY HHHHHHHHHHHHHEEEEECCCCCEEECEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCE TADPRKVADASLVMEAHAGDPELERMAGGAGSSVGTGGMLTKILAAKRAARSGAHTVICS ECCCHHHHHHHHEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEC GREPRVLLRLAEGEPIGSQLVARQAPLAARRQWLADHLQLRGGLVLDDGAVRALQEDGKS CCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCC LLPVGVRGVTGEFERGEVVAVVDASGREIARGLTNYSAAEARRIAGKPSTAIEAELGYMD CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCC EPELIHRDNLVVLA CCCEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA