| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fliI [H]
Identifier: 74317109
GI number: 74317109
Start: 1152766
End: 1154160
Strand: Direct
Name: fliI [H]
Synonym: Tbd_1091
Alternate gene names: 74317109
Gene position: 1152766-1154160 (Clockwise)
Preceding gene: 74317108
Following gene: 74317110
Centisome position: 39.62
GC content: 70.47
Gene sequence:
>1395_bases ATGGATCGCATCGTCCGCCTGCGCGAATACCTCGCCGACTGTCGCCGCGCCACGGGCTGGGCGACGCCGATCGCCGCGAG CGGCCGGCTCACGCGGGTGTCGGGCCTGGTCATGGAAGCCGTCGGCCTGCGCATGCCGGTAGGCAGCCAGTGCCACATCC AGATTCCGGGCGGGCAAAGCATCGAGGCCGAGGTCGCGGGCTTCGCCGGCGACCGGCTATTCATCATGCCGGCTACCGAC ATCTACGGCGTGATGCCCGGCGCGCGCGTGGTGCCGGACAACCCGCTCGCCGCGCAGCCGCCGCGGCTCGGCATGCGCTA CATCCCGCGCCGTCGCGCCCAGGACCGCGTGCGCCAGGTGCCGGTCGGCGACAGCCTGCTCGGACGCGTGCTTGACGGCG CGGGCCGCCCGCTCGACGGTATCGGCCCCTTGTCGCTCGAGCGCCGCGTGCCGCTCTACAGCCGGCCGATCAACCCGCTC GAGCGCGCGCCGATCCGCGAGACGCTCGACGTCGGCGTGCGCGCGATCAACGGCCTGCTGACCGTGGGACGTGGCCAGCG GCTCGGCCTCTTCGCCGGCAGCGGCGTTGGCAAGAGTGTGCTGCTCGGCATGATGGCGCGCATGACCGAGGCCGACGTCG TCGTCGTCGGCCTGATCGGCGAGCGCGGCCGCGAAGTCAAGGAGTTCATCGACCGCATCCTCGGCGCCGAGGGCATGGCG CGCGCCGTGGTGGTCGCGGCGCCGGCCGACCATCCACCGTTGATGCGGCTCAACGGCGCGGCCTACGCGATGTCGATCGC GGAATATTTCCGCGACCAGGGCAAGCACGTACTGCTGATCATGGATTCGCTGACGAGATATGCGATGGCGCAGCGCGAGG TCGCGCTGGCGATCGGCGAGCCGCCGGCGACCAAAGGCTATCCGCCGTCGGTATTCGCCAAGCTGCCGCAGCTCGCCGAG CGCGCCGGCAATGGCCGTAGCGGCAGCGGCTCGATCACGGCGTTCTTCACCGTGCTGATGGAAGGCGACGACCAGCAGGA CCCGATCGCCGACGCCGCTCGCGCGATTCTCGACGGCCACATCGTGCTCTCGCGCGACCTTGCCGACGCCGGGCATTATC CTGCGATCGACATCGAGGCCTCGATCAGCCGGGCGCAGCCCGACCTGCTGACGGAGGAGGCGCTCGAGCGTACGCGCCGA TTCAAATATCTCTATTCGCGCTACATGCGCAGCCGCGATCTGCTCGCAGTCGGCGCCTACGTTCCCGGCGCCGACGTCGT GCTCGACGAGGGCGTACGGCTGTATCCCCGCATGCAGGGCTACCTGATGCAGGGCATGCGCGAGCAGGCCTCGCTCGACG CGGCGCGCGACGGCCTCGAAGGGATACTCGGGTGA
Upstream 100 bases:
>100_bases TGCGCCTCGTTGCATGGAATGACCATGCTGCCTCGTTGCGCCTTGCCAGCCGACTCGACAGCCGCACACTCGAACGCGTC CAACCGGGGTTCTCAGGATA
Downstream 100 bases:
>100_bases AGCCGTTCGCGCTCGCGCGCGTGTTGCAGCTGGCCGAGCGCCGCAGCGAGACGCTGGCGCGGACGGTCAAGCTCGCGCAT GGCGTCTGGCTGCGCGCGCG
Product: flagella ATPase FliI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MDRIVRLREYLADCRRATGWATPIAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPGGQSIEAEVAGFAGDRLFIMPATD IYGVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQVPVGDSLLGRVLDGAGRPLDGIGPLSLERRVPLYSRPINPL ERAPIRETLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMA RAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFAKLPQLAE RAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGHIVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRR FKYLYSRYMRSRDLLAVGAYVPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARDGLEGILG
Sequences:
>Translated_464_residues MDRIVRLREYLADCRRATGWATPIAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPGGQSIEAEVAGFAGDRLFIMPATD IYGVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQVPVGDSLLGRVLDGAGRPLDGIGPLSLERRVPLYSRPINPL ERAPIRETLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMA RAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFAKLPQLAE RAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGHIVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRR FKYLYSRYMRSRDLLAVGAYVPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARDGLEGILG >Mature_464_residues MDRIVRLREYLADCRRATGWATPIAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPGGQSIEAEVAGFAGDRLFIMPATD IYGVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQVPVGDSLLGRVLDGAGRPLDGIGPLSLERRVPLYSRPINPL ERAPIRETLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMA RAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFAKLPQLAE RAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGHIVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRR FKYLYSRYMRSRDLLAVGAYVPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARDGLEGILG
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. May be involved in a specialized protein export pathway that proceeds without signal peptide cleavage [
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=310, Percent_Identity=30, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI50345984, Length=363, Percent_Identity=32.5068870523416, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI4757810, Length=363, Percent_Identity=32.5068870523416, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI19913428, Length=323, Percent_Identity=28.7925696594427, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI19913426, Length=363, Percent_Identity=26.4462809917355, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI19913424, Length=244, Percent_Identity=29.5081967213115, Blast_Score=106, Evalue=6e-23, Organism=Escherichia coli, GI1788251, Length=439, Percent_Identity=63.7813211845103, Blast_Score=520, Evalue=1e-149, Organism=Escherichia coli, GI1790170, Length=303, Percent_Identity=32.013201320132, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1790172, Length=291, Percent_Identity=27.4914089347079, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790217, Length=304, Percent_Identity=27.3026315789474, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988063, Length=366, Percent_Identity=32.2404371584699, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71988080, Length=366, Percent_Identity=32.2404371584699, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25144756, Length=313, Percent_Identity=29.3929712460064, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17570191, Length=361, Percent_Identity=26.3157894736842, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17510931, Length=316, Percent_Identity=27.2151898734177, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71988074, Length=351, Percent_Identity=30.4843304843305, Blast_Score=121, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17565854, Length=281, Percent_Identity=31.3167259786477, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322581, Length=309, Percent_Identity=31.7152103559871, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319370, Length=277, Percent_Identity=32.4909747292419, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319603, Length=320, Percent_Identity=29.375, Blast_Score=132, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6320016, Length=190, Percent_Identity=36.3157894736842, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI24638766, Length=310, Percent_Identity=29.3548387096774, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24658560, Length=361, Percent_Identity=31.3019390581717, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI28574560, Length=311, Percent_Identity=31.5112540192926, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI281361666, Length=323, Percent_Identity=27.2445820433437, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24646341, Length=323, Percent_Identity=27.2445820433437, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI17136796, Length=323, Percent_Identity=27.2445820433437, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24583992, Length=322, Percent_Identity=28.8819875776398, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24583988, Length=244, Percent_Identity=29.5081967213115, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24583986, Length=244, Percent_Identity=29.5081967213115, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24583984, Length=244, Percent_Identity=29.5081967213115, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI20129479, Length=279, Percent_Identity=27.9569892473118, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 50184; Mature: 50184
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS00152 ATPASE_ALPHA_BETA ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIVRLREYLADCRRATGWATPIAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPGGQS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC IEAEVAGFAGDRLFIMPATDIYGVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQV CCHHHHCCCCCEEEEEECHHHHHCCCCCEECCCCCCCCCCCCCCHHHCCHHHHHHHHHCC PVGDSLLGRVLDGAGRPLDGIGPLSLERRVPLYSRPINPLERAPIRETLDVGVRAINGLL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHH TVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMA EECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC RAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGE CEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECC PPATKGYPPSVFAKLPQLAERAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGH CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC IVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRRFKYLYSRYMRSRDLLAVGAY EEEECCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC VPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARDGLEGILG CCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDRIVRLREYLADCRRATGWATPIAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPGGQS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC IEAEVAGFAGDRLFIMPATDIYGVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQV CCHHHHCCCCCEEEEEECHHHHHCCCCCEECCCCCCCCCCCCCCHHHCCHHHHHHHHHCC PVGDSLLGRVLDGAGRPLDGIGPLSLERRVPLYSRPINPLERAPIRETLDVGVRAINGLL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHH TVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMA EECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC RAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGE CEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECC PPATKGYPPSVFAKLPQLAERAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGH CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC IVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRRFKYLYSRYMRSRDLLAVGAY EEEECCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC VPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARDGLEGILG CCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]