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The map label for this gene is ybhR [H]

Identifier: 74317100

GI number: 74317100

Start: 1142066

End: 1143202

Strand: Reverse

Name: ybhR [H]

Synonym: Tbd_1082

Alternate gene names: 74317100

Gene position: 1143202-1142066 (Counterclockwise)

Preceding gene: 74317101

Following gene: 74317099

Centisome position: 39.29

GC content: 64.12

Gene sequence:

>1137_bases
GTGAGGTCCGCGCTGGCCTGGCACCGCCTGTGGGCGATCGTTCTGAAGGAATTCGTGCAGATGCGGCGCGACCGCATCAC
CTTCGCGATGATGGTCGGCATCCCCGTGATCCAGCTCGTGCTGTTCGGGTTCGCGATCAACACCGACCCCAAGCGGCTGC
CGACCGTGGTCTTCGACGCGAGCCAGAGCGCCTATTCGCGCAGCTTCGTCGCCAGCCTCGAAAACAGCGGCTATTTCAAC
GTGCTGGAGACCCCCTCCACCGTCGCCGAGGCGCGCGAGGCGCTCGCCATCGGCGAGGTCCAGTTCATCGTCTCGATTCC
GCCTGATTTCTCCCGCCAGCTGATCCGCGGGGAAAAGCCGGTGCTGCTGCTCGAGGCCGACGCGTCCGATCCCGCCGCCA
CCGGCAACGCGCTCTCGGCGCTCGCGACGATCAACCAGACCGCCTTGCAGCATGACCTCAAGGGCCCGCTGGCGCCGCTG
GCAGGCGGGCCCGCGCCGTTCGAAATCCGCGTTCAGCGCAACTACAACCCCGAGGGCATCACGCAGTACAACATCGTGCC
GGGCCTCATGGGGACGATCCTCACGATGACCATGATCATGATGACCGGCATGGCGATGACCCGCGAACTCGAGCGCGGCA
CGATGGAAAACCTGCTCGCCTTCCCGGTGCACCCGCTCGAAGTCATGATCGGCAAGATCCTGCCCTACATCATCGTCGGC
TACATCCAGGTCGCGGTCATCCTGATCGCCGCGCATTTCCTGTTCGGCGTGCCGATCGCCGGCAGCCTGTCCTTGCTGCT
GGCCTCGGTGCTGGTTTTTCTTGCCGCCAATCTCACGGTCGGCATGATGTTCTCCACGCTGGCCAAGAGCCAGTTGCAGG
CGATGCAGATGACCTTCTTCTTCTTCCTGCCGTCGATGCTGCTGTCCGGATTCATGTTCCCCTTCCGCGGCATGCCGCAC
TGGGCGCAGGTCATCGGCGAGGCCCTGCCGCTTACCCATTTCCTGCGGATCGTTCGCGGCATCATGTTGAAGGGCAACGG
CTGGGCCGAAACCTGGCCCAATGTCTGGCCGCTGCTGCTGTTCATGGCGATCGTGATGGCGATCGGCTTCAAGCGCTACC
GCAAGACGCTCGACTGA

Upstream 100 bases:

>100_bases
GCAGCCTCGCCGCCCTGCCGGCGCTGCGGTTCGAGCGTGCCGAAACAGGGCTGGAACAGGTCTTCATCCGGCTCATGGAC
ACCGTGCAGGACCCGCTGCC

Downstream 100 bases:

>100_bases
CAAACCGCCGCGCGCCCCGGGGGCCGGCCCCGTGCGTCCGCAAATCTTCACCGGTCCGTCACGCCGCCTTCATGTCGCGC
TGGCTTCATGGGCGCATGTT

Product: ABC-2 type transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRSALAWHRLWAIVLKEFVQMRRDRITFAMMVGIPVIQLVLFGFAINTDPKRLPTVVFDASQSAYSRSFVASLENSGYFN
VLETPSTVAEAREALAIGEVQFIVSIPPDFSRQLIRGEKPVLLLEADASDPAATGNALSALATINQTALQHDLKGPLAPL
AGGPAPFEIRVQRNYNPEGITQYNIVPGLMGTILTMTMIMMTGMAMTRELERGTMENLLAFPVHPLEVMIGKILPYIIVG
YIQVAVILIAAHFLFGVPIAGSLSLLLASVLVFLAANLTVGMMFSTLAKSQLQAMQMTFFFFLPSMLLSGFMFPFRGMPH
WAQVIGEALPLTHFLRIVRGIMLKGNGWAETWPNVWPLLLFMAIVMAIGFKRYRKTLD

Sequences:

>Translated_378_residues
MRSALAWHRLWAIVLKEFVQMRRDRITFAMMVGIPVIQLVLFGFAINTDPKRLPTVVFDASQSAYSRSFVASLENSGYFN
VLETPSTVAEAREALAIGEVQFIVSIPPDFSRQLIRGEKPVLLLEADASDPAATGNALSALATINQTALQHDLKGPLAPL
AGGPAPFEIRVQRNYNPEGITQYNIVPGLMGTILTMTMIMMTGMAMTRELERGTMENLLAFPVHPLEVMIGKILPYIIVG
YIQVAVILIAAHFLFGVPIAGSLSLLLASVLVFLAANLTVGMMFSTLAKSQLQAMQMTFFFFLPSMLLSGFMFPFRGMPH
WAQVIGEALPLTHFLRIVRGIMLKGNGWAETWPNVWPLLLFMAIVMAIGFKRYRKTLD
>Mature_378_residues
MRSALAWHRLWAIVLKEFVQMRRDRITFAMMVGIPVIQLVLFGFAINTDPKRLPTVVFDASQSAYSRSFVASLENSGYFN
VLETPSTVAEAREALAIGEVQFIVSIPPDFSRQLIRGEKPVLLLEADASDPAATGNALSALATINQTALQHDLKGPLAPL
AGGPAPFEIRVQRNYNPEGITQYNIVPGLMGTILTMTMIMMTGMAMTRELERGTMENLLAFPVHPLEVMIGKILPYIIVG
YIQVAVILIAAHFLFGVPIAGSLSLLLASVLVFLAANLTVGMMFSTLAKSQLQAMQMTFFFFLPSMLLSGFMFPFRGMPH
WAQVIGEALPLTHFLRIVRGIMLKGNGWAETWPNVWPLLLFMAIVMAIGFKRYRKTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=27.7173913043478, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787011, Length=352, Percent_Identity=28.6931818181818, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI48994943, Length=379, Percent_Identity=28.4960422163588, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI226510979, Length=336, Percent_Identity=28.8690476190476, Blast_Score=122, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24650855, Length=372, Percent_Identity=23.9247311827957, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650853, Length=372, Percent_Identity=23.9247311827957, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI85725260, Length=412, Percent_Identity=22.3300970873786, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85725262, Length=412, Percent_Identity=22.3300970873786, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41808; Mature: 41808

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSALAWHRLWAIVLKEFVQMRRDRITFAMMVGIPVIQLVLFGFAINTDPKRLPTVVFDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
SQSAYSRSFVASLENSGYFNVLETPSTVAEAREALAIGEVQFIVSIPPDFSRQLIRGEKP
CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCC
VLLLEADASDPAATGNALSALATINQTALQHDLKGPLAPLAGGPAPFEIRVQRNYNPEGI
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
TQYNIVPGLMGTILTMTMIMMTGMAMTRELERGTMENLLAFPVHPLEVMIGKILPYIIVG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YIQVAVILIAAHFLFGVPIAGSLSLLLASVLVFLAANLTVGMMFSTLAKSQLQAMQMTFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLPSMLLSGFMFPFRGMPHWAQVIGEALPLTHFLRIVRGIMLKGNGWAETWPNVWPLLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
FMAIVMAIGFKRYRKTLD
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSALAWHRLWAIVLKEFVQMRRDRITFAMMVGIPVIQLVLFGFAINTDPKRLPTVVFDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
SQSAYSRSFVASLENSGYFNVLETPSTVAEAREALAIGEVQFIVSIPPDFSRQLIRGEKP
CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCC
VLLLEADASDPAATGNALSALATINQTALQHDLKGPLAPLAGGPAPFEIRVQRNYNPEGI
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
TQYNIVPGLMGTILTMTMIMMTGMAMTRELERGTMENLLAFPVHPLEVMIGKILPYIIVG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YIQVAVILIAAHFLFGVPIAGSLSLLLASVLVFLAANLTVGMMFSTLAKSQLQAMQMTFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLPSMLLSGFMFPFRGMPHWAQVIGEALPLTHFLRIVRGIMLKGNGWAETWPNVWPLLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
FMAIVMAIGFKRYRKTLD
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]