| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317099
Identifier: 74317099
GI number: 74317099
Start: 1141065
End: 1141994
Strand: Reverse
Name: 74317099
Synonym: Tbd_1081
Alternate gene names: NA
Gene position: 1141994-1141065 (Counterclockwise)
Preceding gene: 74317100
Following gene: 74317098
Centisome position: 39.25
GC content: 67.63
Gene sequence:
>930_bases ATGTCGCGCTGGCTTCATGGGCGCATGTTGAATCGCGTCACCACCCTGCTCCGCGCGCGCCCCGATGCATCGTCCTGCGC GCACACCGAAAGCCCCGCGTGGCCCGCGCACGGCCCGGACGCCACGCCCGACTCGCCGCAGTCCGCGCCCCGCCACTACC GCACGCTCTGGATTTCCGACATCCACCTCGGCACGCCCGGCTGCCAGGCGCGCTACCTGCTCGACTTTCTCAAGCACAAC GAATCCGACACGCTCTATCTGGTCGGCGACATCATCGACGGCTGGCAGCTGAGGCGCGGCTGGTACTGGCCGCGCGCGCA CAACGACGTCGTGCAGAAACTCCTGCGCAAGGCGCGCAAGGGCACGCGCGTGATCTTCGTGCCGGGCAACCACGATTCGA TGGCGCGGCAGTTCATCGGTCTCGCCTTCGGCGACATCGAGGTCGCCGACGAGGTGATCCACGTCACCGCCGACGGCCGC CGCTTTCTCGTCACCCACGGGGACCGCTTCGACGGCGTGATCCAGCACGCGCGCTGGCTCGCCTACATCGGCGACAGCGG CTACACGCTGATCCTCGCGCTCAACCGCTGGTTCAACGGCCTGCGCGCGCGCATGGGCTACCCCTACTGGTCGCTGTCGC AATACATCAAGCACAAGGTCAAGAACGCGGTCAGCTTCATCACCGCGTTCGAGAAGGTCATGATCGACGAGGCGCGGCGA CGCCGCTGCGACGGCGTGATCTGCGGCCACATCCACAAGGCCGAGATCCGCACCGTCGACGGCCTCGTCTACTGCAACGA CGGCGACTGGGTCGAAAGCCTGAGCGCGCTCGCCGAAACCGCCGACGGCACGCTCGAAATCCTCCACTGGACACATTGTC TCGACGCGGCGGCGTCGCCACGGAGCGCCGCAGTGCGGCAGGCCGCATGA
Upstream 100 bases:
>100_bases TCAAGCGCTACCGCAAGACGCTCGACTGACAAACCGCCGCGCGCCCCGGGGGCCGGCCCCGTGCGTCCGCAAATCTTCAC CGGTCCGTCACGCCGCCTTC
Downstream 100 bases:
>100_bases AGATCATGATCGTGACCGACGCCTGGTCGCCACAGGTCAACGGCGTCGTGCGCACGCTGACGACGACGCGCCGCGAAATG GAGGCGATGGGCCACGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; Metallo-Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase Protein; Phosphoesterase; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein; Metallophosphoesterase Family Protein
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSRWLHGRMLNRVTTLLRARPDASSCAHTESPAWPAHGPDATPDSPQSAPRHYRTLWISDIHLGTPGCQARYLLDFLKHN ESDTLYLVGDIIDGWQLRRGWYWPRAHNDVVQKLLRKARKGTRVIFVPGNHDSMARQFIGLAFGDIEVADEVIHVTADGR RFLVTHGDRFDGVIQHARWLAYIGDSGYTLILALNRWFNGLRARMGYPYWSLSQYIKHKVKNAVSFITAFEKVMIDEARR RRCDGVICGHIHKAEIRTVDGLVYCNDGDWVESLSALAETADGTLEILHWTHCLDAAASPRSAAVRQAA
Sequences:
>Translated_309_residues MSRWLHGRMLNRVTTLLRARPDASSCAHTESPAWPAHGPDATPDSPQSAPRHYRTLWISDIHLGTPGCQARYLLDFLKHN ESDTLYLVGDIIDGWQLRRGWYWPRAHNDVVQKLLRKARKGTRVIFVPGNHDSMARQFIGLAFGDIEVADEVIHVTADGR RFLVTHGDRFDGVIQHARWLAYIGDSGYTLILALNRWFNGLRARMGYPYWSLSQYIKHKVKNAVSFITAFEKVMIDEARR RRCDGVICGHIHKAEIRTVDGLVYCNDGDWVESLSALAETADGTLEILHWTHCLDAAASPRSAAVRQAA >Mature_308_residues SRWLHGRMLNRVTTLLRARPDASSCAHTESPAWPAHGPDATPDSPQSAPRHYRTLWISDIHLGTPGCQARYLLDFLKHNE SDTLYLVGDIIDGWQLRRGWYWPRAHNDVVQKLLRKARKGTRVIFVPGNHDSMARQFIGLAFGDIEVADEVIHVTADGRR FLVTHGDRFDGVIQHARWLAYIGDSGYTLILALNRWFNGLRARMGYPYWSLSQYIKHKVKNAVSFITAFEKVMIDEARRR RCDGVICGHIHKAEIRTVDGLVYCNDGDWVESLSALAETADGTLEILHWTHCLDAAASPRSAAVRQAA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34990; Mature: 34859
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWLHGRMLNRVTTLLRARPDASSCAHTESPAWPAHGPDATPDSPQSAPRHYRTLWISD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE IHLGTPGCQARYLLDFLKHNESDTLYLVGDIIDGWQLRRGWYWPRAHNDVVQKLLRKARK EECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEHHCCCCCCCCCHHHHHHHHHHHHC GTRVIFVPGNHDSMARQFIGLAFGDIEVADEVIHVTADGRRFLVTHGDRFDGVIQHARWL CCEEEEEECCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHEE AYIGDSGYTLILALNRWFNGLRARMGYPYWSLSQYIKHKVKNAVSFITAFEKVMIDEARR EEECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRCDGVICGHIHKAEIRTVDGLVYCNDGDWVESLSALAETADGTLEILHWTHCLDAAASP HHCCCEEECCEEHHHEEEECCEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCC RSAAVRQAA HHHHHHCCC >Mature Secondary Structure SRWLHGRMLNRVTTLLRARPDASSCAHTESPAWPAHGPDATPDSPQSAPRHYRTLWISD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE IHLGTPGCQARYLLDFLKHNESDTLYLVGDIIDGWQLRRGWYWPRAHNDVVQKLLRKARK EECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEHHCCCCCCCCCHHHHHHHHHHHHC GTRVIFVPGNHDSMARQFIGLAFGDIEVADEVIHVTADGRRFLVTHGDRFDGVIQHARWL CCEEEEEECCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHEE AYIGDSGYTLILALNRWFNGLRARMGYPYWSLSQYIKHKVKNAVSFITAFEKVMIDEARR EEECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRCDGVICGHIHKAEIRTVDGLVYCNDGDWVESLSALAETADGTLEILHWTHCLDAAASP HHCCCEEECCEEHHHEEEECCEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCC RSAAVRQAA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA