The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ubiE [C]

Identifier: 74317073

GI number: 74317073

Start: 1118802

End: 1119458

Strand: Reverse

Name: ubiE [C]

Synonym: Tbd_1055

Alternate gene names: 74317073

Gene position: 1119458-1118802 (Counterclockwise)

Preceding gene: 74317075

Following gene: 74317072

Centisome position: 38.47

GC content: 67.73

Gene sequence:

>657_bases
ATGACCAGCACGCCACCCACTACGCCCACGACCCGGCTCGACGCCGCCCATTTCGACAGCAAGGCCCGCGCGTGGGACGA
GAACCCGGTGTTCCAGGAACGCGGCAGCAAGATCGCCGACGCGATCCGCGCGACCGTGCCGCTGCGCCGCGACATGGCGG
CGCTCGACTACGGCTGCGGGACGGGCCTGCTTTCCTTCCCGCTCAAGGATGAACTCGGCTCGATCCTGTTGGCCGACAGT
TCGAGCGGAATGCTCGACGTGCTGGCCGAGAAGATCGCCGCGCAAGGCGTCGACAACATGACTCCGGTCAAGCTTGACCT
GCTCGCGGACCCGCCGCCGGCGCAGCGCTTCGACCTGATCTATACGTCGATGACGCTGCACCACGTGCCCGACACGGCGC
GCATCCTCGGCATCTTTCACGCGCTTCTGAAGCCCGGCGCCTATCTGTGCGTCGCCGACCTCGACAAGGAAGACGGTTCC
TTCCACGGCGTCGAGGTCGACGTGCACCACGGCTTCGACCGGGCCGCGCTCGGCCAGCGCGCGACCACCGCCGGCTTCAC
CGACGTGCGCTTTCAGCCCGTGTTCAGCATCAGCAAGGAACAGCCGGCCGGCACGCGCGACTACCCGGTTTTCCTGATGA
CGGCACGGCGCGCCTGA

Upstream 100 bases:

>100_bases
GCACTCCGTTTCAAGGAGCGAAGCGGGCATACCGCAGTCACACGGGGACGCCGGAATCCGGTGGTACCCCTCGCACATTT
CCCCGGCTTACGAAAACGCC

Downstream 100 bases:

>100_bases
CGCAAACGGAGGTCACGAGCATGGGTCTGGAATACATGTTTTTCGATGCGGCGTTGCGCGATCGCTTCGTCGCGTTTGCG
TCGGCGCTCGGCATTCCGAG

Product: S-adenosylmethionine-dependent methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; SAM Dependent Methyltransferase; Pedicted SAM-Dependent Methyltransferase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSTPPTTPTTRLDAAHFDSKARAWDENPVFQERGSKIADAIRATVPLRRDMAALDYGCGTGLLSFPLKDELGSILLADS
SSGMLDVLAEKIAAQGVDNMTPVKLDLLADPPPAQRFDLIYTSMTLHHVPDTARILGIFHALLKPGAYLCVADLDKEDGS
FHGVEVDVHHGFDRAALGQRATTAGFTDVRFQPVFSISKEQPAGTRDYPVFLMTARRA

Sequences:

>Translated_218_residues
MTSTPPTTPTTRLDAAHFDSKARAWDENPVFQERGSKIADAIRATVPLRRDMAALDYGCGTGLLSFPLKDELGSILLADS
SSGMLDVLAEKIAAQGVDNMTPVKLDLLADPPPAQRFDLIYTSMTLHHVPDTARILGIFHALLKPGAYLCVADLDKEDGS
FHGVEVDVHHGFDRAALGQRATTAGFTDVRFQPVFSISKEQPAGTRDYPVFLMTARRA
>Mature_217_residues
TSTPPTTPTTRLDAAHFDSKARAWDENPVFQERGSKIADAIRATVPLRRDMAALDYGCGTGLLSFPLKDELGSILLADSS
SGMLDVLAEKIAAQGVDNMTPVKLDLLADPPPAQRFDLIYTSMTLHHVPDTARILGIFHALLKPGAYLCVADLDKEDGSF
HGVEVDVHHGFDRAALGQRATTAGFTDVRFQPVFSISKEQPAGTRDYPVFLMTARRA

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 23680; Mature: 23549

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPPTTPTTRLDAAHFDSKARAWDENPVFQERGSKIADAIRATVPLRRDMAALDYGCG
CCCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHCCCC
TGLLSFPLKDELGSILLADSSSGMLDVLAEKIAAQGVDNMTPVKLDLLADPPPAQRFDLI
CCEECCCCHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE
YTSMTLHHVPDTARILGIFHALLKPGAYLCVADLDKEDGSFHGVEVDVHHGFDRAALGQR
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHCCC
ATTAGFTDVRFQPVFSISKEQPAGTRDYPVFLMTARRA
CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TSTPPTTPTTRLDAAHFDSKARAWDENPVFQERGSKIADAIRATVPLRRDMAALDYGCG
CCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHCCCC
TGLLSFPLKDELGSILLADSSSGMLDVLAEKIAAQGVDNMTPVKLDLLADPPPAQRFDLI
CCEECCCCHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE
YTSMTLHHVPDTARILGIFHALLKPGAYLCVADLDKEDGSFHGVEVDVHHGFDRAALGQR
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHCCC
ATTAGFTDVRFQPVFSISKEQPAGTRDYPVFLMTARRA
CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA