Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yceI [C]

Identifier: 74317050

GI number: 74317050

Start: 1097401

End: 1097799

Strand: Direct

Name: yceI [C]

Synonym: Tbd_1032

Alternate gene names: 74317050

Gene position: 1097401-1097799 (Clockwise)

Preceding gene: 74317049

Following gene: 74317051

Centisome position: 37.71

GC content: 65.91

Gene sequence:

>399_bases
GTGCGGATCGACGTCTCCTCGGTCGATACGGGGGCTGCGTCCCTGAACGAAACGCTATTGGGCGCGGATTTCTTCGACAG
CGCCAACCATCCGGCCATCACCTTCCGCTCGACACAGATGACGCTCGACGGCGAGCATCCGACGCTCAGCGGCGACCTCA
GCATCAAGGGCGTGACCCGGCGTGTGACGCTCGCACTCGGCAGTTTCCGCTGCGCCGCCGACGAGACCTTCAAGGCCGAC
GTGTGTCTCGCGCAGGCGAGCGTGACGATCCGGCGTTCGGATTTCAACATGCGCAAATACGCCTTCCTCGTCGGCGACGA
GGTTCGGCTCACCCTGGCCCTGCGCGCGGTCAAGGAGACACCGGCACTGCACCTCGCGCGCGGCGATCCCGCCAGGTAA

Upstream 100 bases:

>100_bases
GCTATCGCAGCCTGGGGTTCGTCACGCGCGCACGCACCGCTTCGAAAGAATCAGCGGCACACTCATCGTCGACCGTGCCG
CGCGCACCGGTCGCGCCGAC

Downstream 100 bases:

>100_bases
TAGGTAAAATGGCGTTTTGCCGCATGGAACGCCCAGTGGACCCGCATCAACTCGAACTGCTCGCGCCTGCGCGCGACGCC
GATATCGGTATAGAGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: YceI Like Family Protein; Signal Peptide Protein; YceI Like Family; Signal Peptide; Ycei Family Protein; Periplasmic Protein; Protein YceI

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRIDVSSVDTGAASLNETLLGADFFDSANHPAITFRSTQMTLDGEHPTLSGDLSIKGVTRRVTLALGSFRCAADETFKAD
VCLAQASVTIRRSDFNMRKYAFLVGDEVRLTLALRAVKETPALHLARGDPAR

Sequences:

>Translated_132_residues
MRIDVSSVDTGAASLNETLLGADFFDSANHPAITFRSTQMTLDGEHPTLSGDLSIKGVTRRVTLALGSFRCAADETFKAD
VCLAQASVTIRRSDFNMRKYAFLVGDEVRLTLALRAVKETPALHLARGDPAR
>Mature_132_residues
MRIDVSSVDTGAASLNETLLGADFFDSANHPAITFRSTQMTLDGEHPTLSGDLSIKGVTRRVTLALGSFRCAADETFKAD
VCLAQASVTIRRSDFNMRKYAFLVGDEVRLTLALRAVKETPALHLARGDPAR

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787295, Length=117, Percent_Identity=31.6239316239316, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14299; Mature: 14299

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDVSSVDTGAASLNETLLGADFFDSANHPAITFRSTQMTLDGEHPTLSGDLSIKGVTR
CEEECCCCCCCCCCCCHHEECCCCCCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEEE
RVTLALGSFRCAADETFKADVCLAQASVTIRRSDFNMRKYAFLVGDEVRLTLALRAVKET
EEEEEECCEEECCCCCEECEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEHHCC
PALHLARGDPAR
CEEEEECCCCCC
>Mature Secondary Structure
MRIDVSSVDTGAASLNETLLGADFFDSANHPAITFRSTQMTLDGEHPTLSGDLSIKGVTR
CEEECCCCCCCCCCCCHHEECCCCCCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEEE
RVTLALGSFRCAADETFKADVCLAQASVTIRRSDFNMRKYAFLVGDEVRLTLALRAVKET
EEEEEECCEEECCCCCEECEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEHHCC
PALHLARGDPAR
CEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA