| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317035
Identifier: 74317035
GI number: 74317035
Start: 1085026
End: 1085718
Strand: Reverse
Name: 74317035
Synonym: Tbd_1017
Alternate gene names: NA
Gene position: 1085718-1085026 (Counterclockwise)
Preceding gene: 74317036
Following gene: 74317034
Centisome position: 37.31
GC content: 66.81
Gene sequence:
>693_bases ATGACCGCAGATGCCTATGCCTACTGCGCGACCCTCACGCGCGACCAGTGGGCTTGGGAATTCCTGCGCCGCAATCCGGA CTACCAGCGTGATTACCGCGCCTTCATCGCAATCTGGCGCGCACTCGAAGCGGACTACGGCGCGCCTCCCGATCGCGATT TTTCGAAGTGGAAGCGCGACCCCCGCGCCTATGGCCCGCTTCCCGGCGAGGCCGAAGTCGCAACACCCAAGAGCGAACTG TGCACGGTCGACGACGAGCGCGTGCTGCTCGAATGCTGGATGGGTGCCAAGTGGGGCTTCTACAAATTCCCGCTCGACCC CGCGTGCATCGCGCCCGCGCCCGACGAACTGTCGTGGCGCCCGCCGCCGCAGCAGGAGCGGGAGATCGAAGCACCCTACC GCCTCGACGTCGCGTTCGATCTTTCCCTGCCGTTGCCGCCACAGCTCGAAGCCGCGAAGTTCCGCCTCGTCAGTCGCGCC GCCGACTTGCGGCGTCAGGGCTACGCGGCGCCGAAGACGGTGGCGAATCAGCGCGCCCACTGGACCACGATGCTGCGCCT GCTTGACGGCGCCGCCGCGGCAGACGCGGATGCCACGGGACTGCTGGATGAAGCACGGACGCTGGCTGCGGGTGGCTATC GCGAGATCCCGAGGCTGACACAGGATGCGCACCGGCCAATCAATGATGGATAA
Upstream 100 bases:
>100_bases TGCAGGACACGTTGGCGAAAATCGTCGAAGACAAGAACAACCGCGCGATCCGCTTCGGCGTCGTCAACGTCGCCAGCATG ATCCTGCTGCCGATCTGAAC
Downstream 100 bases:
>100_bases GGCCACGCCGATCGAAATTACCCAGGCCGTCGGGTTTTTCATAACGTAATATCGAAACCCCCAATCAGTAGATCTTAGGG ATCAAAAGCTCCGTGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSEL CTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRA ADLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG
Sequences:
>Translated_230_residues MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSEL CTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRA ADLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG >Mature_229_residues TADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSELC TVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAA DLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26052; Mature: 25921
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRD CCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC PRAYGPLPGEAEVATPKSELCTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWR CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC PPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAADLRRQGYAAPKTVANQRAH CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRD CCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC PRAYGPLPGEAEVATPKSELCTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWR CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC PPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAADLRRQGYAAPKTVANQRAH CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA