| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317036
Identifier: 74317036
GI number: 74317036
Start: 1085721
End: 1086443
Strand: Reverse
Name: 74317036
Synonym: Tbd_1018
Alternate gene names: NA
Gene position: 1086443-1085721 (Counterclockwise)
Preceding gene: 74317037
Following gene: 74317035
Centisome position: 37.34
GC content: 63.21
Gene sequence:
>723_bases GTGAAACCGGGTCCTGCCCTCCTTGTCTACCTGCTCGTCGCCGGACTGCTCGCCGCCTGCGGTGGCCAGCCGATTCAGCG CAAGGATGGCAGCAGCAGCCTGCGCGGGTTCAGCCTCAAAGAACTCGTGAAGAGCGACGTCGACACGGTCGTCGAGATCC ATCAACACGAAGTCGCAACAGCACTGAAGACGCTGACGCTCAAGCTCTATCGCCGCAACCCGGGCGAATGGCGCAAAGCG GGATTCAGGAGCGCCGAAGCCGCGACCGATGCGCTGTTCGAAGCGCTGCCGAACTGGCGCTCATCGTCGCAACGCTCGAT CAATTGGGAAGCGAGCGTACTCGATGCGCTGCGCGAGGACTACGCCGGCAATCGCGTCGAAGCCCTCATGGGCGGCCTGC TCGTGATGCACATGGCCGCCTACAACCACGAGACCGAGTTCTACCTGCTCTCGGAACTCGATCCGCAGAAGTTCTACAAC GCCGCGCGCAACACCGAGGCCATCGTCTGGCGACTCGCCACCGCACGCGACCGGGGCGGGAAACCGCTGCTGCTCGCAAA CGGCGTCGACGACAAGGGCGTCGCCAATCTCAGCTTCGAGCGCGAATTCGGCAAGCTCATCGGCCTGCAGGACACGTTGG CGAAAATCGTCGAAGACAAGAACAACCGCGCGATCCGCTTCGGCGTCGTCAACGTCGCCAGCATGATCCTGCTGCCGATC TGA
Upstream 100 bases:
>100_bases ATCGTCTGCTCGCCCGTCCCTTCGACGAACAGCCGGCGTTCGAGGCTTACGCGGCCGAGCCGCCGGACTGGGCGAAAAGG ATCGAAGTAAGCTGCTCTTC
Downstream 100 bases:
>100_bases ACATGACCGCAGATGCCTATGCCTACTGCGCGACCCTCACGCGCGACCAGTGGGCTTGGGAATTCCTGCGCCGCAATCCG GACTACCAGCGTGATTACCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI
Sequences:
>Translated_240_residues MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI >Mature_240_residues MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26495; Mature: 26495
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVAT CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALKTLTLKLYRRNPGEWRKAGFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALRED HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYNAARNTEAIVWRLATARDRGG HCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHEEEEHHHHCCCC KPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI CEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVAT CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALKTLTLKLYRRNPGEWRKAGFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALRED HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYNAARNTEAIVWRLATARDRGG HCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHEEEEHHHHCCCC KPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI CEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA