Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317036

Identifier: 74317036

GI number: 74317036

Start: 1085721

End: 1086443

Strand: Reverse

Name: 74317036

Synonym: Tbd_1018

Alternate gene names: NA

Gene position: 1086443-1085721 (Counterclockwise)

Preceding gene: 74317037

Following gene: 74317035

Centisome position: 37.34

GC content: 63.21

Gene sequence:

>723_bases
GTGAAACCGGGTCCTGCCCTCCTTGTCTACCTGCTCGTCGCCGGACTGCTCGCCGCCTGCGGTGGCCAGCCGATTCAGCG
CAAGGATGGCAGCAGCAGCCTGCGCGGGTTCAGCCTCAAAGAACTCGTGAAGAGCGACGTCGACACGGTCGTCGAGATCC
ATCAACACGAAGTCGCAACAGCACTGAAGACGCTGACGCTCAAGCTCTATCGCCGCAACCCGGGCGAATGGCGCAAAGCG
GGATTCAGGAGCGCCGAAGCCGCGACCGATGCGCTGTTCGAAGCGCTGCCGAACTGGCGCTCATCGTCGCAACGCTCGAT
CAATTGGGAAGCGAGCGTACTCGATGCGCTGCGCGAGGACTACGCCGGCAATCGCGTCGAAGCCCTCATGGGCGGCCTGC
TCGTGATGCACATGGCCGCCTACAACCACGAGACCGAGTTCTACCTGCTCTCGGAACTCGATCCGCAGAAGTTCTACAAC
GCCGCGCGCAACACCGAGGCCATCGTCTGGCGACTCGCCACCGCACGCGACCGGGGCGGGAAACCGCTGCTGCTCGCAAA
CGGCGTCGACGACAAGGGCGTCGCCAATCTCAGCTTCGAGCGCGAATTCGGCAAGCTCATCGGCCTGCAGGACACGTTGG
CGAAAATCGTCGAAGACAAGAACAACCGCGCGATCCGCTTCGGCGTCGTCAACGTCGCCAGCATGATCCTGCTGCCGATC
TGA

Upstream 100 bases:

>100_bases
ATCGTCTGCTCGCCCGTCCCTTCGACGAACAGCCGGCGTTCGAGGCTTACGCGGCCGAGCCGCCGGACTGGGCGAAAAGG
ATCGAAGTAAGCTGCTCTTC

Downstream 100 bases:

>100_bases
ACATGACCGCAGATGCCTATGCCTACTGCGCGACCCTCACGCGCGACCAGTGGGCTTGGGAATTCCTGCGCCGCAATCCG
GACTACCAGCGTGATTACCG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA
GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN
AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI

Sequences:

>Translated_240_residues
MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA
GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN
AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI
>Mature_240_residues
MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVATALKTLTLKLYRRNPGEWRKA
GFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALREDYAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYN
AARNTEAIVWRLATARDRGGKPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26495; Mature: 26495

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVAT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALKTLTLKLYRRNPGEWRKAGFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALRED
HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYNAARNTEAIVWRLATARDRGG
HCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHEEEEHHHHCCCC
KPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI
CEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MKPGPALLVYLLVAGLLAACGGQPIQRKDGSSSLRGFSLKELVKSDVDTVVEIHQHEVAT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALKTLTLKLYRRNPGEWRKAGFRSAEAATDALFEALPNWRSSSQRSINWEASVLDALRED
HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YAGNRVEALMGGLLVMHMAAYNHETEFYLLSELDPQKFYNAARNTEAIVWRLATARDRGG
HCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHEEEEHHHHCCCC
KPLLLANGVDDKGVANLSFEREFGKLIGLQDTLAKIVEDKNNRAIRFGVVNVASMILLPI
CEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA