| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317032
Identifier: 74317032
GI number: 74317032
Start: 1082945
End: 1083310
Strand: Direct
Name: 74317032
Synonym: Tbd_1014
Alternate gene names: NA
Gene position: 1082945-1083310 (Clockwise)
Preceding gene: 74317031
Following gene: 74317033
Centisome position: 37.22
GC content: 62.02
Gene sequence:
>366_bases TTGGAACGCCCAGCCAAGAGTGAACTCCCGCCGATTCCGGCGAAACGCTATTTCACGATCGGTGAAGTCTCCGAGCTGTG CGCCGTCAAGGCGCACGTGCTGCGTTACTGGGAGCAGGAATTCTCCCAGTTGCGGCCGGTCAAGCGGAGGGGCAATCGGC GCTACTACCAGCACCACGAAGTCCTGCTGATCCGGCGCATCCGCGAACTCCTCTACGAAGAAGGTTTCACGATCAGCGGT GCGCGCCAACGCCTCGAACATGACGCCGATTCGGCGCCGAGCCCTGCGCCGGCAGGCGCGACGACCGGCCTCGATGTCGG CGAACTGCGCAGCGAACTCGCCGCGATTCTGAAAATATTAGGTTAA
Upstream 100 bases:
>100_bases CGCAATCCGAAGACCGGCGAGGAAATGCCGATCTCGGCTCGCCGCGTGGTGACCTTCCACGCCAGTCAGAAACTCAAGTC GCAGGTCGAAGGCGCCCGAA
Downstream 100 bases:
>100_bases CAGGCTTACGCCGGACGCGACTCCTCTGCTAGAATCTCGGGCTTCGTCGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCA TGGGGTGCAGGGGGTCGGAA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG
Sequences:
>Translated_121_residues MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG >Mature_121_residues MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13794; Mature: 13794
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHE CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLLIRRIRELLYEEGFTISGARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKIL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH G C >Mature Secondary Structure MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHE CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLLIRRIRELLYEEGFTISGARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKIL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA