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The map label for this gene is pheT

Identifier: 74317030

GI number: 74317030

Start: 1080276

End: 1082621

Strand: Direct

Name: pheT

Synonym: Tbd_1012

Alternate gene names: 74317030

Gene position: 1080276-1082621 (Clockwise)

Preceding gene: 74317029

Following gene: 74317031

Centisome position: 37.13

GC content: 68.93

Gene sequence:

>2346_bases
ATGCAATTTTCCGAAGCCTGGCTGCGCAAGCTCGTCAATCCCGCGCTCGATACCACCGAACTCGCCCACGCCCTGACGAT
GGCCGGGCTCGAAGTCGAAGCGCTGACGGCGGCGGCACCGCCTTTCAACGATGTGGTCGTGGCGGAAATTCTCTCGGCCC
AGAAGCATCCCGACGCTGACCGCCTGCGCGTATGCCAGGTCGACATCGGTGAGGCCGCGCCCGCGACGATCGTCTGCGGC
GCGCCGAACGCGGCGGCGGGTCTCAAGGTTCCGTGCGCGCGCCCGGGGGCGAAACTGCCGGGCATCGAAATCAAGGTCGC
CAAGGTGCGCGGCGTCGAGTCGTTCGGCATGCTGTGCTCGACGAAGGAACTCGGCCTCGAAGGCGCAGCCGACGGCCTCA
TGGTGCTTCCCGACGATGCGCCCGTGGGGGAGGACCTGCGTGGCTGGCTCAATCTCGACGATACGCTCGTCACGCTGAAG
CTCACGCCGAACCGGGCGGACTGCCTGTCGCTCGTCGGCATCGCGCGCGAAGTCGGCGCGATTACCGGTGCAGAAGTCCG
CATTCCCCAGGCATCGCCGGTCGCGCCCCGCATCGCCGATACCGTCGAGGTGACGGTCGCCGCGAGCGACGCGTGTTCGC
GCTACCTCGGCCGCGTCGTGCGCGGCATCGACGCCCAGGCGACGACGCCGCGCTGGATGGCCGAGCGCCTCGAGCGGGGC
GGCATCCGCCCGCTGCTCGCGCCGATCGACGTCACCAATTACGTCCTGCTCGAGCTGGGCCAGCCGATGCACGCCTTCGC
GCTGTCGCGCCTGTCCGGCGGGATCGAGGTGCGGCTGGCGCGCGCGGGAGAAACGCTCGCGCTGCTCAGTGGGCAGACGG
TCGAACTGTCGCCCGACATGCTGGTGATCGCCGACGCGAGCGGTCCGGTCGCGCTCGCCGGGATCATGGGCGGGCAGGCG
ACCAGCGTCGAGCGCGCCACCGTCGACGTCTTCCTCGAAGCCGCGTTCTTCGCCCCCGCAGCGATCGCCGGGCGTGCGCG
TCGCCTGGGGCTTTCGACCGATTCGGCGCACCGCTTCGAGCGCGGCGTCGATTTCGGTGCGATCCACGCGGCGATGGAGC
GCGCGACGCAACTGCTGCTCGACATCTGTGGCGGTCAGCCGGGGCCGATCAGCGAGGTCACGGGTTCGCTGCCGCGGCGC
GAGCCGATCGAGCTGCGTCTTTCCCGCCTGCGCCGCGTTGCCGGCGTCGAGCTTGGCGCCGATCAGGTCATCCGGGATCT
CGCCGCGCTCGGCTGTGTCGTCGAGCAGGCGGATGAGCGTCTCGTCGTTACCCCGCCGAGCTTTCGCTTCGACCTCGCGA
TCGAGGAAGACCTGATCGAGGAGGCCGTCCGTCTGTTCGGCTACGACCGCATTCCGGCGCGGCCGCCCGCCGCGCCCTCG
CGCATGCTTGCGCAAGACGAAACGCGGATCGCCGACGACGCGCTGCGGCAAAAGATGGTCGACCTCGATTATCAGGAGGT
CATCACCTACAGCTTCGTCGATCCGGCAGGGGAGCAGGCGCTCGACCCCGACGTACGCCTGCTCACGCTCGCGAACCCGA
TCGCGAGCCAGCTTTCGGTCATGCGTACGACGCTATGGGGCGGACTGATCGAGACGCTGCGCCACAACCTGAACCGTCAG
CAGGAGCGGGTGCGGATCTTCGAACTCGGGAGGGTGTACGCCTCGCTCGCCGAGCAGCCGCGGAAGCTCGGCGGCCTGGC
CTACGGCGAAGCGCTGCCCGAGCAGTGGGGCGTGCCGGGGCGACGCGTCGATTTCTTCGACGTCAAGGGCGACCTCGAGC
GGCTTTTCGGGCAGCCGCTCGACGCCGGGCGCGGCGAGCATCCTGCGCTTCATCCCGGGCAAAGCGCCGCGCTCTGGGTG
GACGGTCACCGCGGGGGCTGGATCGGCGCCCTGCATCCGCGTCTGGTGCAGGCGTTCGACCTCGCCGCCGCGCCGGTATT
GTTCGAGCTCGACAGCGAAATCCTTGCCCGGCGTGCGTTGCCGCGACACGCGGGGCTGTCGCGCTTTCCGCAGGTCCGCC
GCGATCTTGCCTTCGTCCTGGACGCCGGCCTTGCCGCGGGCGACTTGCTCGCGGCGCTACGTGAAGCGGCGCCGGCATCG
ATACGCGCGATCGAAGTGTTCGACGACTACCGGGGAAAGGGTGTGGATCAGAACCAAAAAAGCCTTGCAATACGGGTAGT
TATGCAAGATACTGAACGCACATTGACGGATCGGGATGTCGACGAAGCGGTGCAGAAACTGGTCGACGCCGCCGCCCGTC
GGTGCAGCGCCACGCTGCGCGCATGA

Upstream 100 bases:

>100_bases
AATTAGTCGGGCGCGGATCGCTTCGTCGGAGAGTTGTCCTTGCACGGCATGGGCCGGAGCGGTTTCCTGAAGAATTTCAA
CTAAATACGGCGCACTTATC

Downstream 100 bases:

>100_bases
CTGATTTTTCACCTGCCATTGCGGCCTCTACACCATGACGACTCTCACCAAAGCTGATCTGGCCGAACTGCTGTTCGAAA
AAGTGGGCTTGAACAAACGC

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTAAAPPFNDVVVAEILSAQKHPDADRLRVCQVDIGEAAPATIVCG
APNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCSTKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLK
LTPNRADCLSLVGIAREVGAITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPRWMAERLERG
GIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSGQTVELSPDMLVIADASGPVALAGIMGGQA
TSVERATVDVFLEAAFFAPAAIAGRARRLGLSTDSAHRFERGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRR
EPIELRLSRLRRVAGVELGADQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRIPARPPAAPS
RMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDVRLLTLANPIASQLSVMRTTLWGGLIETLRHNLNRQ
QERVRIFELGRVYASLAEQPRKLGGLAYGEALPEQWGVPGRRVDFFDVKGDLERLFGQPLDAGRGEHPALHPGQSAALWV
DGHRGGWIGALHPRLVQAFDLAAAPVLFELDSEILARRALPRHAGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPAS
IRAIEVFDDYRGKGVDQNQKSLAIRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLRA

Sequences:

>Translated_781_residues
MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTAAAPPFNDVVVAEILSAQKHPDADRLRVCQVDIGEAAPATIVCG
APNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCSTKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLK
LTPNRADCLSLVGIAREVGAITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPRWMAERLERG
GIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSGQTVELSPDMLVIADASGPVALAGIMGGQA
TSVERATVDVFLEAAFFAPAAIAGRARRLGLSTDSAHRFERGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRR
EPIELRLSRLRRVAGVELGADQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRIPARPPAAPS
RMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDVRLLTLANPIASQLSVMRTTLWGGLIETLRHNLNRQ
QERVRIFELGRVYASLAEQPRKLGGLAYGEALPEQWGVPGRRVDFFDVKGDLERLFGQPLDAGRGEHPALHPGQSAALWV
DGHRGGWIGALHPRLVQAFDLAAAPVLFELDSEILARRALPRHAGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPAS
IRAIEVFDDYRGKGVDQNQKSLAIRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLRA
>Mature_781_residues
MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTAAAPPFNDVVVAEILSAQKHPDADRLRVCQVDIGEAAPATIVCG
APNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCSTKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLK
LTPNRADCLSLVGIAREVGAITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPRWMAERLERG
GIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSGQTVELSPDMLVIADASGPVALAGIMGGQA
TSVERATVDVFLEAAFFAPAAIAGRARRLGLSTDSAHRFERGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRR
EPIELRLSRLRRVAGVELGADQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRIPARPPAAPS
RMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDVRLLTLANPIASQLSVMRTTLWGGLIETLRHNLNRQ
QERVRIFELGRVYASLAEQPRKLGGLAYGEALPEQWGVPGRRVDFFDVKGDLERLFGQPLDAGRGEHPALHPGQSAALWV
DGHRGGWIGALHPRLVQAFDLAAAPVLFELDSEILARRALPRHAGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPAS
IRAIEVFDDYRGKGVDQNQKSLAIRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLRA

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain

Homologues:

Organism=Escherichia coli, GI1788006, Length=794, Percent_Identity=46.4735516372796, Blast_Score=691, Evalue=0.0,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYFB_THIDA (Q3SK29)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_314770.1
- ProteinModelPortal:   Q3SK29
- SMR:   Q3SK29
- STRING:   Q3SK29
- GeneID:   3671236
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1012
- NMPDR:   fig|292415.3.peg.742
- eggNOG:   COG0072
- HOGENOM:   HBG399638
- OMA:   ADKLRVC
- PhylomeDB:   Q3SK29
- BioCyc:   TDEN292415:TBD_1012-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00283
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547
- Gene3D:   G3DSA:3.50.40.10
- Gene3D:   G3DSA:3.30.56.20
- Gene3D:   G3DSA:3.30.70.380
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00873
- SMART:   SM00874
- SMART:   SM00896
- TIGRFAMs:   TIGR00472

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 83931; Mature: 83931

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD; PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTAAAPPFNDVVVAEILSAQKHPDAD
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHCCCCCCCCHHHHHHHHHHCCCCCHH
RLRVCQVDIGEAAPATIVCGAPNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCS
HEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHC
TKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLKLTPNRADCLSLVGIAREVGA
CHHHCCCCCCCCEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
ITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPRWMAERLERG
CCCCEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSGQTVELSPDM
CCCCEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEECCCE
LVIADASGPVALAGIMGGQATSVERATVDVFLEAAFFAPAAIAGRARRLGLSTDSAHRFE
EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRREPIELRLSRLRRVAGVELGA
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
DQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRIPARPPAAPS
HHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCH
RMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDVRLLTLANPIASQLSV
HHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCCEEEEECCHHHHHHHH
MRTTLWGGLIETLRHNLNRQQERVRIFELGRVYASLAEQPRKLGGLAYGEALPEQWGVPG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCC
RRVDFFDVKGDLERLFGQPLDAGRGEHPALHPGQSAALWVDGHRGGWIGALHPRLVQAFD
CEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHH
LAAAPVLFELDSEILARRALPRHAGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPAS
HHHCCHHHHCCHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
IRAIEVFDDYRGKGVDQNQKSLAIRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLR
EEEEEEEHHCCCCCCCCCCCCEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTAAAPPFNDVVVAEILSAQKHPDAD
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHCCCCCCCCHHHHHHHHHHCCCCCHH
RLRVCQVDIGEAAPATIVCGAPNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCS
HEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHC
TKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLKLTPNRADCLSLVGIAREVGA
CHHHCCCCCCCCEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
ITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPRWMAERLERG
CCCCEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSGQTVELSPDM
CCCCEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEECCCE
LVIADASGPVALAGIMGGQATSVERATVDVFLEAAFFAPAAIAGRARRLGLSTDSAHRFE
EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRREPIELRLSRLRRVAGVELGA
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
DQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRIPARPPAAPS
HHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCH
RMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDVRLLTLANPIASQLSV
HHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCCEEEEECCHHHHHHHH
MRTTLWGGLIETLRHNLNRQQERVRIFELGRVYASLAEQPRKLGGLAYGEALPEQWGVPG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCC
RRVDFFDVKGDLERLFGQPLDAGRGEHPALHPGQSAALWVDGHRGGWIGALHPRLVQAFD
CEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHH
LAAAPVLFELDSEILARRALPRHAGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPAS
HHHCCHHHHCCHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
IRAIEVFDDYRGKGVDQNQKSLAIRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLR
EEEEEEEHHCCCCCCCCCCCCEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA