| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is bcp [H]
Identifier: 74317017
GI number: 74317017
Start: 1066989
End: 1067444
Strand: Reverse
Name: bcp [H]
Synonym: Tbd_0999
Alternate gene names: 74317017
Gene position: 1067444-1066989 (Counterclockwise)
Preceding gene: 74317018
Following gene: 74317016
Centisome position: 36.68
GC content: 60.31
Gene sequence:
>456_bases ATGAACGAACCCGAAATCCAGGACTTCGAACTCCCCACGACCGGCAACACGCCCTTCAAGCTTTCCGGGCAGCGCGGCAA GAATGTCGTGGTCTACTTCTACCCGAAGGACAACACCTCGGGCTGTACGCTCGAGGGCCAGGAATTCCGCGACCTCTATC CCGAATTCACCAAAGCCAACACGATCGTCGTCGGCGTCTCGCGTGACAGCCTGAAATCGCACGAGGGCTTCAAGGCGGCG CACGGTTTTCCGTTCGAACTCCTTGCCGACACCGACGAGAAGGTTTGCGAACTGTTCGGCGTGATGAAATTGAAGAACAT GTACGGCAAGCAGGTGCGCGGCGTCGAGCGGAGCACCTTCGTGTTCGACGTGAACGGCAAGCTCGTGAAGAGCTGGCGCG GGTTGAAGGCGCCGGGGCATGCGGCGGAGGTGCTGGGGTTTGTGCAGGGGCTGTGA
Upstream 100 bases:
>100_bases GTGCTCGCTTTCTGCCAGGCACGCGCGGTCGACGGCGGCACCGGCGCCGTCCTCGTGCTGCTCAAATCGTCAACCCGCTA GCAAATCGAGAAAGATCGTA
Downstream 100 bases:
>100_bases AGTCGCGACCCCGCGCCGCCATGGTGAACCAGCGAAGCCGCCCGCGGTCCACGGCGTGGTTAGACGCGCGGCACGGTAGT GGTTAAACCTTCACCGGGGT
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MNEPEIQDFELPTTGNTPFKLSGQRGKNVVVYFYPKDNTSGCTLEGQEFRDLYPEFTKANTIVVGVSRDSLKSHEGFKAA HGFPFELLADTDEKVCELFGVMKLKNMYGKQVRGVERSTFVFDVNGKLVKSWRGLKAPGHAAEVLGFVQGL
Sequences:
>Translated_151_residues MNEPEIQDFELPTTGNTPFKLSGQRGKNVVVYFYPKDNTSGCTLEGQEFRDLYPEFTKANTIVVGVSRDSLKSHEGFKAA HGFPFELLADTDEKVCELFGVMKLKNMYGKQVRGVERSTFVFDVNGKLVKSWRGLKAPGHAAEVLGFVQGL >Mature_151_residues MNEPEIQDFELPTTGNTPFKLSGQRGKNVVVYFYPKDNTSGCTLEGQEFRDLYPEFTKANTIVVGVSRDSLKSHEGFKAA HGFPFELLADTDEKVCELFGVMKLKNMYGKQVRGVERSTFVFDVNGKLVKSWRGLKAPGHAAEVLGFVQGL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=141, Percent_Identity=35.4609929078014, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16826; Mature: 16826
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPEIQDFELPTTGNTPFKLSGQRGKNVVVYFYPKDNTSGCTLEGQEFRDLYPEFTKAN CCCCCCCCEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCCEECCHHHHHHCCCCCCCC TIVVGVSRDSLKSHEGFKAAHGFPFELLADTDEKVCELFGVMKLKNMYGKQVRGVERSTF EEEEEECHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VFDVNGKLVKSWRGLKAPGHAAEVLGFVQGL EEECCCCEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNEPEIQDFELPTTGNTPFKLSGQRGKNVVVYFYPKDNTSGCTLEGQEFRDLYPEFTKAN CCCCCCCCEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCCEECCHHHHHHCCCCCCCC TIVVGVSRDSLKSHEGFKAAHGFPFELLADTDEKVCELFGVMKLKNMYGKQVRGVERSTF EEEEEECHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VFDVNGKLVKSWRGLKAPGHAAEVLGFVQGL EEECCCCEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]