| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317004
Identifier: 74317004
GI number: 74317004
Start: 1050225
End: 1050935
Strand: Reverse
Name: 74317004
Synonym: Tbd_0986
Alternate gene names: NA
Gene position: 1050935-1050225 (Counterclockwise)
Preceding gene: 74317005
Following gene: 74317003
Centisome position: 36.12
GC content: 65.12
Gene sequence:
>711_bases ATGATGCGCCCTGCCCTGTTCACCCTCGCCGCGCTTTTCGCCAGCGTCGCGCTCGCCGCCCCGCCTGCCGAGGCGCCGGC CGAGGCGCACCCGCAGAGCACGCCTTGGATCGACGTGACGCCGACACCCTATGGCCCGCTGATGAGGCAGCAGGCCGCGC CGCCGCCGTATCGCGACTACCAGATGAACCGGGTGCTGACGCCGGAGGAAAAACAGCGCTGGCGCGAACTGACGATGCCG GTCATCGCGCACATGATGCAGATGGATGCGCGCGAGGCGATGAATTATTTCGCCGCGAAATACAAGGCCAAGCCCGGCGT TTCGTTCGACGAGGTCGTCGAGTCGATGATGCTGCGCGCGAATCAGGTCAACCTCAAGTTCGTCGGCAGCAATCTGATCT GGAAGGAGTTCCGCTCGGTGCTGAACGACGAGACCGCGCCGCGGATCGAGGTCTTCAGCTTCTGCGATATCGCCGTCGGC CGCGATCTGCTGCGGCTGATTCCGGAAATGGCGGTATTCCTGCCCTGCCGCATCGCGGTCATGGAGGACGCCGACAAGAA CATCTGGGTCATGACGCTCGACTGGGATCTGATCTGGCTCGACCAGGCCGGCAAGCAAGCCGGGATCACGCCCGAACTGC GCGAAGGCGCGCGCGTCGTCCGCGAAAAACTCGACAGCGTCATGCGCGCGGGCGCCAACGGCGAGCTCTGA
Upstream 100 bases:
>100_bases CGGCCGAACTCGCCGTGCTCGAAGCGCTCGTCGCGGCCTACGCATTGACGCCCGCACTGTGATGCATAGGATGAAGTTGT TACCGTCCGGGAGACCGAAC
Downstream 100 bases:
>100_bases CCGCACCGACGGGGCACGGGGCGACAAGCGGCCTGCGCAGCGCTTCACACCACGCAGCGCGCACGCAGTTCTTCGGTATT CTTCACGCGACCGCAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL
Sequences:
>Translated_236_residues MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL >Mature_236_residues MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26680; Mature: 26680
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCC QMNRVLTPEEKQRWRELTMPVIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH NQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVGRDLLRLIPEMAVFLPCRIAV CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL EECCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCC QMNRVLTPEEKQRWRELTMPVIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH NQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVGRDLLRLIPEMAVFLPCRIAV CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL EECCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA