Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317004

Identifier: 74317004

GI number: 74317004

Start: 1050225

End: 1050935

Strand: Reverse

Name: 74317004

Synonym: Tbd_0986

Alternate gene names: NA

Gene position: 1050935-1050225 (Counterclockwise)

Preceding gene: 74317005

Following gene: 74317003

Centisome position: 36.12

GC content: 65.12

Gene sequence:

>711_bases
ATGATGCGCCCTGCCCTGTTCACCCTCGCCGCGCTTTTCGCCAGCGTCGCGCTCGCCGCCCCGCCTGCCGAGGCGCCGGC
CGAGGCGCACCCGCAGAGCACGCCTTGGATCGACGTGACGCCGACACCCTATGGCCCGCTGATGAGGCAGCAGGCCGCGC
CGCCGCCGTATCGCGACTACCAGATGAACCGGGTGCTGACGCCGGAGGAAAAACAGCGCTGGCGCGAACTGACGATGCCG
GTCATCGCGCACATGATGCAGATGGATGCGCGCGAGGCGATGAATTATTTCGCCGCGAAATACAAGGCCAAGCCCGGCGT
TTCGTTCGACGAGGTCGTCGAGTCGATGATGCTGCGCGCGAATCAGGTCAACCTCAAGTTCGTCGGCAGCAATCTGATCT
GGAAGGAGTTCCGCTCGGTGCTGAACGACGAGACCGCGCCGCGGATCGAGGTCTTCAGCTTCTGCGATATCGCCGTCGGC
CGCGATCTGCTGCGGCTGATTCCGGAAATGGCGGTATTCCTGCCCTGCCGCATCGCGGTCATGGAGGACGCCGACAAGAA
CATCTGGGTCATGACGCTCGACTGGGATCTGATCTGGCTCGACCAGGCCGGCAAGCAAGCCGGGATCACGCCCGAACTGC
GCGAAGGCGCGCGCGTCGTCCGCGAAAAACTCGACAGCGTCATGCGCGCGGGCGCCAACGGCGAGCTCTGA

Upstream 100 bases:

>100_bases
CGGCCGAACTCGCCGTGCTCGAAGCGCTCGTCGCGGCCTACGCATTGACGCCCGCACTGTGATGCATAGGATGAAGTTGT
TACCGTCCGGGAGACCGAAC

Downstream 100 bases:

>100_bases
CCGCACCGACGGGGCACGGGGCGACAAGCGGCCTGCGCAGCGCTTCACACCACGCAGCGCGCACGCAGTTCTTCGGTATT
CTTCACGCGACCGCAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP
VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG
RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL

Sequences:

>Translated_236_residues
MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP
VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG
RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL
>Mature_236_residues
MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDYQMNRVLTPEEKQRWRELTMP
VIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRANQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVG
RDLLRLIPEMAVFLPCRIAVMEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26680; Mature: 26680

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCC
QMNRVLTPEEKQRWRELTMPVIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVGRDLLRLIPEMAVFLPCRIAV
CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
MEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL
EECCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMRPALFTLAALFASVALAAPPAEAPAEAHPQSTPWIDVTPTPYGPLMRQQAAPPPYRDY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCC
QMNRVLTPEEKQRWRELTMPVIAHMMQMDAREAMNYFAAKYKAKPGVSFDEVVESMMLRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NQVNLKFVGSNLIWKEFRSVLNDETAPRIEVFSFCDIAVGRDLLRLIPEMAVFLPCRIAV
CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
MEDADKNIWVMTLDWDLIWLDQAGKQAGITPELREGARVVREKLDSVMRAGANGEL
EECCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA