| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317003
Identifier: 74317003
GI number: 74317003
Start: 1049082
End: 1050113
Strand: Reverse
Name: 74317003
Synonym: Tbd_0985
Alternate gene names: NA
Gene position: 1050113-1049082 (Counterclockwise)
Preceding gene: 74317004
Following gene: 74316998
Centisome position: 36.09
GC content: 67.83
Gene sequence:
>1032_bases ATGACAGCTTCCTCCCCGTTCCGCTCGCTTCCCGCGCTTGAGCAAGACTTCGCCGACGGCCTGCTCGCGATGCTCGAAAA GCATCGCGGCCTTGGCGTCTTCGTCCTCGTTCTTGCGAACGCGGCTTACGATCCGCGACTGTGGGAACGCCTCTCGCCGC CACTTGCAGTTCGCCACGACGAACTCGCGACGGCGCTCCGGAACGCGCTGCGCGAGGGCCGACAGATCGACGAACCGGAC GACGACGTTTTGGTCTTCCTCAAGCTCGATGCGATCGGCTTCGGCCGCGTCGGGCTGATGGAGAGCCGGCGCGCGGGGCC TTGGCAGGTCGCGTTCAACCCGGTCCGCGCCCTGCGCCCGCCGCGCATCAGCGGCACGGCATTCGGCGCGCTGCTGCGCC CGTTCGACGGAGGGGGCTTTCATTTCAACAAGCCCTTCCTGATGAAGGAAGTGCTGTGGGAAGGCGACCTCGCCGGCATG CACGTGCGCATGCTGTACAACAAGTTTCCGTTCGCCCGCCTCCACGGCCTGCTCGTGCCGGAGCCGCTGCGCGAAGCGCC GCAGTTCCTGACTTCGGAATCGCACGCCTGGGCCTGGGAGGTCTGCGCGACGGCGGCGGTGCCCGGGCTCTGCCTCGGCT ACAACAGCAACGGCGCGGGTGCTTCGGTGAACCACCTGCATTTCCAGAGCTTCGTGCAGGCGACGCCGCTGCCGATACAG GACGCGCGCTTCGTCCACAATGGCGGCGCGGCGCCCTATCCGCTCGCCTGCCTGCGCTTTGCCGATCGCGCCGAGGCCTG GCACGCGCTCGAGCGGCTGCATCGCCGCGACACCCCCTACAACCTCGTCTACAGCCAGGGATGCATGCATCTCGTCGCCC GCGCCCCCCAGGATGCGCCGGCCTTGAATGCGCGCGTCCGCGGCTACGGATGGAGCGAAATGGCCGGCGCGGTCACGCGC TTCAGCCGTGAGGATTACGAAGGTTTCAGCGCGGCCGGCTTCGCCGACGAGTTGGCGCTTTTTGCGGTGTGA
Upstream 100 bases:
>100_bases GGGCACGGGGCGACAAGCGGCCTGCGCAGCGCTTCACACCACGCAGCGCGCACGCAGTTCTTCGGTATTCTTCACGCGAC CGCAAATCCCGCCACCCGCC
Downstream 100 bases:
>100_bases AGCGGCGCACGCGCGCCGAACGGATCAGATTTCGATCACCTGCCCCTGCATCAGGGCTTCGATTCGCCACGCGGGCGCGG CCTCGCGCAACTCGTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTASSPFRSLPALEQDFADGLLAMLEKHRGLGVFVLVLANAAYDPRLWERLSPPLAVRHDELATALRNALREGRQIDEPD DDVLVFLKLDAIGFGRVGLMESRRAGPWQVAFNPVRALRPPRISGTAFGALLRPFDGGGFHFNKPFLMKEVLWEGDLAGM HVRMLYNKFPFARLHGLLVPEPLREAPQFLTSESHAWAWEVCATAAVPGLCLGYNSNGAGASVNHLHFQSFVQATPLPIQ DARFVHNGGAAPYPLACLRFADRAEAWHALERLHRRDTPYNLVYSQGCMHLVARAPQDAPALNARVRGYGWSEMAGAVTR FSREDYEGFSAAGFADELALFAV
Sequences:
>Translated_343_residues MTASSPFRSLPALEQDFADGLLAMLEKHRGLGVFVLVLANAAYDPRLWERLSPPLAVRHDELATALRNALREGRQIDEPD DDVLVFLKLDAIGFGRVGLMESRRAGPWQVAFNPVRALRPPRISGTAFGALLRPFDGGGFHFNKPFLMKEVLWEGDLAGM HVRMLYNKFPFARLHGLLVPEPLREAPQFLTSESHAWAWEVCATAAVPGLCLGYNSNGAGASVNHLHFQSFVQATPLPIQ DARFVHNGGAAPYPLACLRFADRAEAWHALERLHRRDTPYNLVYSQGCMHLVARAPQDAPALNARVRGYGWSEMAGAVTR FSREDYEGFSAAGFADELALFAV >Mature_342_residues TASSPFRSLPALEQDFADGLLAMLEKHRGLGVFVLVLANAAYDPRLWERLSPPLAVRHDELATALRNALREGRQIDEPDD DVLVFLKLDAIGFGRVGLMESRRAGPWQVAFNPVRALRPPRISGTAFGALLRPFDGGGFHFNKPFLMKEVLWEGDLAGMH VRMLYNKFPFARLHGLLVPEPLREAPQFLTSESHAWAWEVCATAAVPGLCLGYNSNGAGASVNHLHFQSFVQATPLPIQD ARFVHNGGAAPYPLACLRFADRAEAWHALERLHRRDTPYNLVYSQGCMHLVARAPQDAPALNARVRGYGWSEMAGAVTRF SREDYEGFSAAGFADELALFAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37916; Mature: 37785
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSPFRSLPALEQDFADGLLAMLEKHRGLGVFVLVLANAAYDPRLWERLSPPLAVRHD CCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCEECHH ELATALRNALREGRQIDEPDDDVLVFLKLDAIGFGRVGLMESRRAGPWQVAFNPVRALRP HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEECHHHHCCC PRISGTAFGALLRPFDGGGFHFNKPFLMKEVLWEGDLAGMHVRMLYNKFPFARLHGLLVP CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCC EPLREAPQFLTSESHAWAWEVCATAAVPGLCLGYNSNGAGASVNHLHFQSFVQATPLPIQ HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC DARFVHNGGAAPYPLACLRFADRAEAWHALERLHRRDTPYNLVYSQGCMHLVARAPQDAP CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCC ALNARVRGYGWSEMAGAVTRFSREDYEGFSAAGFADELALFAV CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TASSPFRSLPALEQDFADGLLAMLEKHRGLGVFVLVLANAAYDPRLWERLSPPLAVRHD CCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCEECHH ELATALRNALREGRQIDEPDDDVLVFLKLDAIGFGRVGLMESRRAGPWQVAFNPVRALRP HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEECHHHHCCC PRISGTAFGALLRPFDGGGFHFNKPFLMKEVLWEGDLAGMHVRMLYNKFPFARLHGLLVP CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCC EPLREAPQFLTSESHAWAWEVCATAAVPGLCLGYNSNGAGASVNHLHFQSFVQATPLPIQ HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC DARFVHNGGAAPYPLACLRFADRAEAWHALERLHRRDTPYNLVYSQGCMHLVARAPQDAP CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCC ALNARVRGYGWSEMAGAVTRFSREDYEGFSAAGFADELALFAV CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA