Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316990

Identifier: 74316990

GI number: 74316990

Start: 1035689

End: 1037008

Strand: Reverse

Name: 74316990

Synonym: Tbd_0972

Alternate gene names: NA

Gene position: 1037008-1035689 (Counterclockwise)

Preceding gene: 74316992

Following gene: 74316989

Centisome position: 35.64

GC content: 69.24

Gene sequence:

>1320_bases
ATGCCGGGCAAACCCGCAGCGAACGCCATGACCTCAGACGCATCCCCTCCGTCCCACATCGTCGGCGGAGGCATCAATAC
CGGCGACTCGGAGCAACCCGTCGCCGTGACCCAGATGCTCGGCGCCGCCAGCAGCGCGCCCGTGCGTGAAGAAGCGCTGC
GCGAACGGTTCTTGTCCTTCGACCCTCTGTTCGACGCGACGTCCCGGCTGGTCGCCCACGAACTCGTCTTGCGCGGCCGC
ACCGCCGCCCCGGACGCTGCGCCGGAACTCCGGCAGATGGACGAGGACATGCTGTTGACGGGCCTGTATTCGTTGACGCA
GGACGGCCTTTCCGAAGCGTTGCCGCTGCTGGTCCGAATCAGTACAGGCGTGCTGTTCAGCGAGATCCCGCGCGAGATCA
ACCAGCGCCAGCTGATCTGGTGCGTGCGTCTTTCCAGTTCCCGCGATCTCGCGCGGGCACTGGCCCTGCAGGACGCCGGC
CTCAATTTCTGTCCGACGCTCGACCGCGGCGACGCCGTCGTGCAGGACAGCGCGTCGGCCTGGCCCTATCTCGCCTGCCA
TGCTGACGACGTGCGGCCGAGGACGAGTGCCCGCCTGATCGTCGAAGGGATTCGCAACGCGCCGGCCCTCGCGCGCTGGC
CCGTCGACGCGTGGTTCCGCGGCAGCTTCTTTTCCGGCGACACCCAACCCGTAGCGAGCAGCCACGAGTTGGCCATGCAG
CTCGACCTGCTGGCGATCGCGCTGCGCGAGCCCGTCGACACACTCGCGCAGTTCTTTCGCCTCAACCCGAACATGGCCCA
GCGTTTCCTCGCGATCGCCAACTCGCCGGTGGGCGGGCTGAGCCGGCCCGCCGAGTCGGCGGCCCACGCACTCGTCATGC
TCGGCGGGCCGCGCGCACGTCGCGTGGCCGCCTTGCTTGCGCTCGCCGGCGGGGCGCCGGGCGATGCGAGCCGCCACTAT
GCCGTGACCGCACTCACGCGTGCGCTGTTCATGGGCAAGATCACCCGGCTCGGCGCACCGGCCGAGAGCGCGGCGGCCGC
GTTCGAGATCGGCCTGCTGTCGACCGCCACCTATGCCCTTTCCCTGCCGGTGGAGAGTCTGATACGCAGGCTCGGCCTGT
CGGCGACGAGCGCGCGCGCCTTGAGCGCCCACCCTTCCGCCGAGGGCAGGCTGCTGCAGTTGACTTACGCCTGCGAGAGC
AACGATGCCGAGACCCTGGCGCGCTTTGCCCAGCAGCTCGGCGTTCCGCTGCACCAGATATCGGTCGCCTATCTCGACGC
GCTGATCGCCGCGTCGGCCCTCGATGTCGCGCTGCATTGA

Upstream 100 bases:

>100_bases
GCCGTGCCGAGCAGCCTCGTGTTACGGAACATGGTTTTTCCTCCTTGCAGCGTAGCGCCCATGATGCACGATATCGGCGA
AACTGCCGCGCGGCGCTAGA

Downstream 100 bases:

>100_bases
CGGCGTAAAATGGCGGCTTTTGCGCATCGCCAGCCCATGCACCCGACCCTCGTATTCGACATTGAGACCATTCCCGACCT
GGCCGGCTTCGCCGCGGTCC

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MPGKPAANAMTSDASPPSHIVGGGINTGDSEQPVAVTQMLGAASSAPVREEALRERFLSFDPLFDATSRLVAHELVLRGR
TAAPDAAPELRQMDEDMLLTGLYSLTQDGLSEALPLLVRISTGVLFSEIPREINQRQLIWCVRLSSSRDLARALALQDAG
LNFCPTLDRGDAVVQDSASAWPYLACHADDVRPRTSARLIVEGIRNAPALARWPVDAWFRGSFFSGDTQPVASSHELAMQ
LDLLAIALREPVDTLAQFFRLNPNMAQRFLAIANSPVGGLSRPAESAAHALVMLGGPRARRVAALLALAGGAPGDASRHY
AVTALTRALFMGKITRLGAPAESAAAAFEIGLLSTATYALSLPVESLIRRLGLSATSARALSAHPSAEGRLLQLTYACES
NDAETLARFAQQLGVPLHQISVAYLDALIAASALDVALH

Sequences:

>Translated_439_residues
MPGKPAANAMTSDASPPSHIVGGGINTGDSEQPVAVTQMLGAASSAPVREEALRERFLSFDPLFDATSRLVAHELVLRGR
TAAPDAAPELRQMDEDMLLTGLYSLTQDGLSEALPLLVRISTGVLFSEIPREINQRQLIWCVRLSSSRDLARALALQDAG
LNFCPTLDRGDAVVQDSASAWPYLACHADDVRPRTSARLIVEGIRNAPALARWPVDAWFRGSFFSGDTQPVASSHELAMQ
LDLLAIALREPVDTLAQFFRLNPNMAQRFLAIANSPVGGLSRPAESAAHALVMLGGPRARRVAALLALAGGAPGDASRHY
AVTALTRALFMGKITRLGAPAESAAAAFEIGLLSTATYALSLPVESLIRRLGLSATSARALSAHPSAEGRLLQLTYACES
NDAETLARFAQQLGVPLHQISVAYLDALIAASALDVALH
>Mature_438_residues
PGKPAANAMTSDASPPSHIVGGGINTGDSEQPVAVTQMLGAASSAPVREEALRERFLSFDPLFDATSRLVAHELVLRGRT
AAPDAAPELRQMDEDMLLTGLYSLTQDGLSEALPLLVRISTGVLFSEIPREINQRQLIWCVRLSSSRDLARALALQDAGL
NFCPTLDRGDAVVQDSASAWPYLACHADDVRPRTSARLIVEGIRNAPALARWPVDAWFRGSFFSGDTQPVASSHELAMQL
DLLAIALREPVDTLAQFFRLNPNMAQRFLAIANSPVGGLSRPAESAAHALVMLGGPRARRVAALLALAGGAPGDASRHYA
VTALTRALFMGKITRLGAPAESAAAAFEIGLLSTATYALSLPVESLIRRLGLSATSARALSAHPSAEGRLLQLTYACESN
DAETLARFAQQLGVPLHQISVAYLDALIAASALDVALH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46547; Mature: 46415

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKPAANAMTSDASPPSHIVGGGINTGDSEQPVAVTQMLGAASSAPVREEALRERFLSF
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC
DPLFDATSRLVAHELVLRGRTAAPDAAPELRQMDEDMLLTGLYSLTQDGLSEALPLLVRI
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGVLFSEIPREINQRQLIWCVRLSSSRDLARALALQDAGLNFCPTLDRGDAVVQDSASA
HCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
WPYLACHADDVRPRTSARLIVEGIRNAPALARWPVDAWFRGSFFSGDTQPVASSHELAMQ
CCEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCCCCCCHHHHHH
LDLLAIALREPVDTLAQFFRLNPNMAQRFLAIANSPVGGLSRPAESAAHALVMLGGPRAR
HHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEECCCHHH
RVAALLALAGGAPGDASRHYAVTALTRALFMGKITRLGAPAESAAAAFEIGLLSTATYAL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHE
SLPVESLIRRLGLSATSARALSAHPSAEGRLLQLTYACESNDAETLARFAQQLGVPLHQI
ECCHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHH
SVAYLDALIAASALDVALH
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGKPAANAMTSDASPPSHIVGGGINTGDSEQPVAVTQMLGAASSAPVREEALRERFLSF
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC
DPLFDATSRLVAHELVLRGRTAAPDAAPELRQMDEDMLLTGLYSLTQDGLSEALPLLVRI
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGVLFSEIPREINQRQLIWCVRLSSSRDLARALALQDAGLNFCPTLDRGDAVVQDSASA
HCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
WPYLACHADDVRPRTSARLIVEGIRNAPALARWPVDAWFRGSFFSGDTQPVASSHELAMQ
CCEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCCCCCCHHHHHH
LDLLAIALREPVDTLAQFFRLNPNMAQRFLAIANSPVGGLSRPAESAAHALVMLGGPRAR
HHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEECCCHHH
RVAALLALAGGAPGDASRHYAVTALTRALFMGKITRLGAPAESAAAAFEIGLLSTATYAL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHE
SLPVESLIRRLGLSATSARALSAHPSAEGRLLQLTYACESNDAETLARFAQQLGVPLHQI
ECCHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHH
SVAYLDALIAASALDVALH
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA