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The map label for this gene is yciM [H]

Identifier: 74316977

GI number: 74316977

Start: 1020983

End: 1022167

Strand: Direct

Name: yciM [H]

Synonym: Tbd_0959

Alternate gene names: 74316977

Gene position: 1020983-1022167 (Clockwise)

Preceding gene: 74316976

Following gene: 74316978

Centisome position: 35.09

GC content: 66.41

Gene sequence:

>1185_bases
ATGGAATTCGAATTCTGGTGGCTGCTCGCGTTTCCGCTCTTTTTCGCCCTCGGCTGGATCGCGGCCCGGGTCGACATCCG
GCAGGTCGTCACCGAATCGCGGGCGCTGCCCAACTCGTATTTCCGCGGCCTCAATTTCCTGCTCAATGAGCAGCCGGACA
AGGCCATCGAGGCGTTTCTGGAAGTCGTCAAGCTCGAGCCCGAGACCATCGATTTGCATTTTGCGCTGGGCGGACTGTTC
CGGCGCCGCGGCGAATTCGACCGCGCCATCCGCATGCACGAGCACCTGCTCGAGCGCGAATATCCTCAGGGTCACAAAGG
GCTCGCCGAGGAGCAGCGCCTGCGGGCGATGAGCGAGCTGGGCCAGGACTACCTCAAGGCCGGCCTGCTCGATCGCGCCG
AGCAGGTGTTCGGCAAGCTGCTCGAGACCTCCCAGCACGGGCAGGCGCGCACGCATCTGCTCGAAATCTACGTGCAGGAA
AAGGACTGGCAGAAAGCGATCGACGCGGCGCGCCTGCTCGAGCGCGACACGAGCAAGCCGCTGAACGCGGATATCGCGCA
CTTTTATTGCGAGCTCGCCCTGCTCGAGTCAGCCAAGGGCAATTCGGACGCCGCAGCAGCGCAGCTGCAGCAGGCGCTCG
CCGCGAACCGCCAGTCGGTGCGCGCGAACCTGATGACGGGCGACCTGCACGCCGCGGCCGGGCGGCACGAAGCGGCGATC
GCGGCGTGGCGTCTGGTCGAGACCCAGAGCGCGGGTCACATGGCGCTCGTCGTCGACCGCGTGCTCGGGAGCTATCGCCA
GCTTGGGCGCGTCGGCGAGGGCGTGCAGTGGCTCCGCGCCTTCTATGCGCGGCAGCCTTCGCACGATGTTTTCAACGCCT
TGTATCTGGCGGTGTCCGAGACCGAAGGGGCGGCGGCCGCGCGCCAACTCGCACGAGAGGAACTGCGCCGCAACCCGAGC
CTGCGCACGCTCGATCGCCTGCTCGAGGCCGAAATCGTCACGGCAGACCCCGAGCAGCGTGAGCTGTTGCAGGTGGAAAA
GAGCCTCGTCGCCTCGTACAGCCAGCGCATGATGCGCTACCAGTGCGGCAGCTGCGGCTTCAAGGCCAAGCAATTCTTCT
GGCGTTGTCCGGCGTGCGGGCGCTGGGACAGCTTCGATCCCGAGCGCGGCGAAGGCGAGAGCTAG

Upstream 100 bases:

>100_bases
GACGCTCTTCCGCCTGCGGCGCGAGCTTGCGCGCAAGCCGCGCCTGCCCGAGCCGGATACGACGACGATTCCGACCGATC
TGCCGGGCGTGTGACCGCGG

Downstream 100 bases:

>100_bases
AGGCACGATCCAGGGGGCAGGGAAGAAGAATGACGCACAAGATTATCGTCGCGCTGGATTTTCCGGCGGGTGCCCCGGCG
CTGGCACTGGCGGATCGGCT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFLEVVKLEPETIDLHFALGGLF
RRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQE
KDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAI
AAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAAAARQLAREELRRNPS
LRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES

Sequences:

>Translated_394_residues
MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFLEVVKLEPETIDLHFALGGLF
RRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQE
KDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAI
AAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAAAARQLAREELRRNPS
LRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES
>Mature_394_residues
MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFLEVVKLEPETIDLHFALGGLF
RRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQE
KDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAI
AAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAAAARQLAREELRRNPS
LRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=382, Percent_Identity=35.0785340314136, Blast_Score=227, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44789; Mature: 44789

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
EVVKLEPETIDLHFALGGLFRRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSEL
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQEKDWQKAIDAARLLERDTSKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
LNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAI
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHH
AAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
TEGAAAARQLAREELRRNPSLRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRY
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES
HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFEFWWLLAFPLFFALGWIAARVDIRQVVTESRALPNSYFRGLNFLLNEQPDKAIEAFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
EVVKLEPETIDLHFALGGLFRRRGEFDRAIRMHEHLLEREYPQGHKGLAEEQRLRAMSEL
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GQDYLKAGLLDRAEQVFGKLLETSQHGQARTHLLEIYVQEKDWQKAIDAARLLERDTSKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
LNADIAHFYCELALLESAKGNSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAAI
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHH
AAWRLVETQSAGHMALVVDRVLGSYRQLGRVGEGVQWLRAFYARQPSHDVFNALYLAVSE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
TEGAAAARQLAREELRRNPSLRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRY
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QCGSCGFKAKQFFWRCPACGRWDSFDPERGEGES
HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]