| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316912
Identifier: 74316912
GI number: 74316912
Start: 944212
End: 944643
Strand: Reverse
Name: 74316912
Synonym: Tbd_0894
Alternate gene names: NA
Gene position: 944643-944212 (Counterclockwise)
Preceding gene: 74316913
Following gene: 74316911
Centisome position: 32.46
GC content: 60.42
Gene sequence:
>432_bases TTGAGCGCCTATATCGACACCAGTGCGCTGGCCAAGTGCTATATCCGTGAACCGCGCTCACTGGATGTACTCGACTGGGT CGATGCACAGGATGAAGTCGCGACCAGCCCACTCACGCTAGTGGAATTCCGCTGCGTGCTGGCACGCCGTCGGCGCGCTC AACAAATCGATCTGCAGCTTGAACGCGTTGCCCTCGCCGAATTTGACCGTGACGTGCAAGCGACCGCCTGGCGCATCCAG CAGGATGCCTCCAGCCTGTTCGTCGAGGCGAGACAACTCATCGACCTGATTCCGGAACTGCCCCTGCGCGCATTGGACGC GCTGCATCTGGCCTATGCCCGCCATTACGGTGCAGTCAGTTTCGCCACCGCCGACAAGCATCAAGCCGACGCGGCCAGAG CGCTCGGTATCCCCGTTTTCACCTTTTATTGA
Upstream 100 bases:
>100_bases CCAAGCGCCGGGTACGCTCGTTGCGGGCGTTTCTGGAAAGCCAGCCCATGCAAACGGTCCCCAGCGAGGACATTCTGGCG GAAGAGCGAGAGGATCGCAT
Downstream 100 bases:
>100_bases ATGGCATCATGACCGACCCCACCAACGCCCCCGCCCTCGACGAAAACCAGATCATCGCCGAGCGCCGCGCCAAGCTCGCC GCGATCCGCGAGGCGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQ QDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY
Sequences:
>Translated_143_residues MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQ QDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY >Mature_142_residues SAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQQ DASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY
Specific function: Unknown
COG id: COG1848
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16177; Mature: 16045
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQL CCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ERVALAEFDRDVQATAWRIQQDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE FATADKHQADAARALGIPVFTFY ECCCCCHHHHHHHHHCCCEEECC >Mature Secondary Structure SAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQL CCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ERVALAEFDRDVQATAWRIQQDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE FATADKHQADAARALGIPVFTFY ECCCCCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA