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The map label for this gene is ybbN [H]

Identifier: 74316904

GI number: 74316904

Start: 935067

End: 935930

Strand: Reverse

Name: ybbN [H]

Synonym: Tbd_0886

Alternate gene names: 74316904

Gene position: 935930-935067 (Counterclockwise)

Preceding gene: 74316905

Following gene: 74316903

Centisome position: 32.16

GC content: 67.25

Gene sequence:

>864_bases
ATGACGCTCTCGCCCCACGTCTTCGACGCCACCGCCGACAATTTCAATCGCCTGGTTCTGGAGAATTCGCACAAGGGACC
CGTGCTGGTCCACTTCTGGACCCCGAAGGCCGGGCCCTGCTTCGTGCTGATGCCGCGGCTCGTGCGGCTCGCGGCCGAGT
ACGGCGGCAAGTTCCTGCTGGTGATGCTGAACGCCGAGGAGCTTCCGCAACTCGCACAGCGCTTCGCCGTGAACTCGGTT
CCGACCGTGAAATTCTTCTGGCGCGGCGAAGTCGCGCACACGATCCACGGCGCCGAGCCCGACAGCACTTTTCGCGAAGC
TCTCGACCGCTTCATCGCCGGCGACGCCAACCGCGCGCATGCTCTCGGCGTCGCCGCGTGGCAGGCCGGCAAACTGTCGG
AGGCGCGCATGCTGCTCGCCAACGCCGCCATGGCCGAGCCGGACAATCTCGACATTCCGCGCGACCTCGCCAAGCTGCTA
TGGGCCGAAGGCGACGGCGATCAGGCGCTGAAACTGCTCGAGAGCCTGCCGCCCGAGGCACGCAAGGACGCGCGCATCGC
ACCGCTCCACGCCCACCTGCGCCTGGCCGAGACCGCGCGCCAGGCGCCTGCACTCGCCACACTCGACGAGCACATAGCAA
GCCAGCCTGACGACATCGAGACGCACTATCAGCGCGCCGCCGTGCTGCTGGCGGGCGACGACTACGCGGGCGCGATGGAC
GAACTGCTGTTCATCGCACGCACCGATCGCGACTTCGGCCAGGATATCGGCCGCATCAGCCTGCTCGCGTTGTTCGACCT
GCTCGGCAGCGCCGATCCGCTGACGCTCAAATACCGGCGCCTGCTGTCCGAGTCGCTGCATTGA

Upstream 100 bases:

>100_bases
AGGTCGTGCCGGACGCGGGCCACTCGGCGTTCGAGCCCGGCATCGCCCGTGCACTGGTCGCCGCCTGCGACCGCTTCGCT
GCCACCGGAGCCCTGATCTG

Downstream 100 bases:

>100_bases
ACTTCGCGCATCCGGCCTTCACGCCCTACCGCGAACTCGTCGCCGAACTCGCACTGCCGCACGGCCTGCCGACGCTCGAC
GCGCTGAACGCCTCGGCCGC

Product: putative thioredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTLSPHVFDATADNFNRLVLENSHKGPVLVHFWTPKAGPCFVLMPRLVRLAAEYGGKFLLVMLNAEELPQLAQRFAVNSV
PTVKFFWRGEVAHTIHGAEPDSTFREALDRFIAGDANRAHALGVAAWQAGKLSEARMLLANAAMAEPDNLDIPRDLAKLL
WAEGDGDQALKLLESLPPEARKDARIAPLHAHLRLAETARQAPALATLDEHIASQPDDIETHYQRAAVLLAGDDYAGAMD
ELLFIARTDRDFGQDIGRISLLALFDLLGSADPLTLKYRRLLSESLH

Sequences:

>Translated_287_residues
MTLSPHVFDATADNFNRLVLENSHKGPVLVHFWTPKAGPCFVLMPRLVRLAAEYGGKFLLVMLNAEELPQLAQRFAVNSV
PTVKFFWRGEVAHTIHGAEPDSTFREALDRFIAGDANRAHALGVAAWQAGKLSEARMLLANAAMAEPDNLDIPRDLAKLL
WAEGDGDQALKLLESLPPEARKDARIAPLHAHLRLAETARQAPALATLDEHIASQPDDIETHYQRAAVLLAGDDYAGAMD
ELLFIARTDRDFGQDIGRISLLALFDLLGSADPLTLKYRRLLSESLH
>Mature_286_residues
TLSPHVFDATADNFNRLVLENSHKGPVLVHFWTPKAGPCFVLMPRLVRLAAEYGGKFLLVMLNAEELPQLAQRFAVNSVP
TVKFFWRGEVAHTIHGAEPDSTFREALDRFIAGDANRAHALGVAAWQAGKLSEARMLLANAAMAEPDNLDIPRDLAKLLW
AEGDGDQALKLLESLPPEARKDARIAPLHAHLRLAETARQAPALATLDEHIASQPDDIETHYQRAAVLLAGDDYAGAMDE
LLFIARTDRDFGQDIGRISLLALFDLLGSADPLTLKYRRLLSESLH

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=282, Percent_Identity=27.3049645390071, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082331, Length=111, Percent_Identity=35.1351351351351, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788936, Length=104, Percent_Identity=32.6923076923077, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31620; Mature: 31489

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSPHVFDATADNFNRLVLENSHKGPVLVHFWTPKAGPCFVLMPRLVRLAAEYGGKFLL
CCCCCCEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEE
VMLNAEELPQLAQRFAVNSVPTVKFFWRGEVAHTIHGAEPDSTFREALDRFIAGDANRAH
EEECHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
ALGVAAWQAGKLSEARMLLANAAMAEPDNLDIPRDLAKLLWAEGDGDQALKLLESLPPEA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCH
RKDARIAPLHAHLRLAETARQAPALATLDEHIASQPDDIETHYQRAAVLLAGDDYAGAMD
HCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCHHHHH
ELLFIARTDRDFGQDIGRISLLALFDLLGSADPLTLKYRRLLSESLH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLSPHVFDATADNFNRLVLENSHKGPVLVHFWTPKAGPCFVLMPRLVRLAAEYGGKFLL
CCCCCEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEE
VMLNAEELPQLAQRFAVNSVPTVKFFWRGEVAHTIHGAEPDSTFREALDRFIAGDANRAH
EEECHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
ALGVAAWQAGKLSEARMLLANAAMAEPDNLDIPRDLAKLLWAEGDGDQALKLLESLPPEA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCH
RKDARIAPLHAHLRLAETARQAPALATLDEHIASQPDDIETHYQRAAVLLAGDDYAGAMD
HCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCHHHHH
ELLFIARTDRDFGQDIGRISLLALFDLLGSADPLTLKYRRLLSESLH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]