| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pip [H]
Identifier: 74316905
GI number: 74316905
Start: 935930
End: 936892
Strand: Reverse
Name: pip [H]
Synonym: Tbd_0887
Alternate gene names: 74316905
Gene position: 936892-935930 (Counterclockwise)
Preceding gene: 74316909
Following gene: 74316904
Centisome position: 32.2
GC content: 69.16
Gene sequence:
>963_bases ATGTCAGGCCCCGCGTCGCTCTATCCGCCGATCACCCCCTACGCCAGCGGCCTGCTCGAGACCGACGGCGTCCACCGCAT CTACTGGGAAACCTCGGGCAACCCCGCAGGCATCCCCGTGCTCTTCGTCCACGGTGGCCCGGGGGCCGGCACGTCGGCCA ACCAGAGACGCTTCTTCGATCCCGCGCGCTACCGCATCGTGCTGTTCGATCAGCGCGGCTGCGGCCGCTCGACGCCGCAC GGCGAACTCGCCGACAATACGACGCCGCACCTCATCGCCGACATGGAAGCGCTGCGCGACGAACTCGACGTCGCCTCATG GCTCGTGTTCGGCGGCTCCTGGGGATCGACGCTCGCGCTGGCCTATGCCCAGGCTCATCCCGAGCGCTGCCGCGGCCTCG TGCTGCGTGGCATCTTCCTCTGCCGCCCGCAGGAGATCGACTGGTTTCTCTACGGGATCCGCAGCTTTTTCCCCGAAGCG CAGCGCCAGCTCGCGGAATTCATCCCCGAAGACGAGCGTGACGATCTGCTCGTCGCCTACCATCGCCGCCTGGTCGATCC CGATCCGGCCGTGCATCGCCCGGCCGCTTGGCAGTGGGCGACCTTCGAGGCCTCGTGCTCGACGCTGCTGCCGAGTGCCG AACTCGTCGCCGCGTTCGGCAGCGAACGGACCGCGCTCTCGTTGTCGCGCATCGAGGCGCACTACTTCGTCAATGGCATC TTCCTTCCCGACGACAGCCTGCTCGCCAACGTCGCGCGCATCCGCCACATCCCCGCGCTGATCGTGCAGGGTCGCTACGA CGCCGTCTGCCCGATCACCTCGGCCGACGACCTCGCGCGGGCCTGGCCCGAAGCGCACTACCAGGTCGTGCCGGACGCGG GCCACTCGGCGTTCGAGCCCGGCATCGCCCGTGCACTGGTCGCCGCCTGCGACCGCTTCGCTGCCACCGGAGCCCTGATC TGA
Upstream 100 bases:
>100_bases ACGTACCCGCCCGGCGCCTGTCGATACGGGCGCGGCCGGCGACCCTTCTGCCAGGGCGGCGAGACGCTATCATGCGAGTT CTCCGTCGTAACCCAAGCTC
Downstream 100 bases:
>100_bases TGACGCTCTCGCCCCACGTCTTCGACGCCACCGCCGACAATTTCAATCGCCTGGTTCTGGAGAATTCGCACAAGGGACCC GTGCTGGTCCACTTCTGGAC
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSGPASLYPPITPYASGLLETDGVHRIYWETSGNPAGIPVLFVHGGPGAGTSANQRRFFDPARYRIVLFDQRGCGRSTPH GELADNTTPHLIADMEALRDELDVASWLVFGGSWGSTLALAYAQAHPERCRGLVLRGIFLCRPQEIDWFLYGIRSFFPEA QRQLAEFIPEDERDDLLVAYHRRLVDPDPAVHRPAAWQWATFEASCSTLLPSAELVAAFGSERTALSLSRIEAHYFVNGI FLPDDSLLANVARIRHIPALIVQGRYDAVCPITSADDLARAWPEAHYQVVPDAGHSAFEPGIARALVAACDRFAATGALI
Sequences:
>Translated_320_residues MSGPASLYPPITPYASGLLETDGVHRIYWETSGNPAGIPVLFVHGGPGAGTSANQRRFFDPARYRIVLFDQRGCGRSTPH GELADNTTPHLIADMEALRDELDVASWLVFGGSWGSTLALAYAQAHPERCRGLVLRGIFLCRPQEIDWFLYGIRSFFPEA QRQLAEFIPEDERDDLLVAYHRRLVDPDPAVHRPAAWQWATFEASCSTLLPSAELVAAFGSERTALSLSRIEAHYFVNGI FLPDDSLLANVARIRHIPALIVQGRYDAVCPITSADDLARAWPEAHYQVVPDAGHSAFEPGIARALVAACDRFAATGALI >Mature_319_residues SGPASLYPPITPYASGLLETDGVHRIYWETSGNPAGIPVLFVHGGPGAGTSANQRRFFDPARYRIVLFDQRGCGRSTPHG ELADNTTPHLIADMEALRDELDVASWLVFGGSWGSTLALAYAQAHPERCRGLVLRGIFLCRPQEIDWFLYGIRSFFPEAQ RQLAEFIPEDERDDLLVAYHRRLVDPDPAVHRPAAWQWATFEASCSTLLPSAELVAAFGSERTALSLSRIEAHYFVNGIF LPDDSLLANVARIRHIPALIVQGRYDAVCPITSADDLARAWPEAHYQVVPDAGHSAFEPGIARALVAACDRFAATGALI
Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005944 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 35105; Mature: 34974
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPASLYPPITPYASGLLETDGVHRIYWETSGNPAGIPVLFVHGGPGAGTSANQRRFFD CCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC PARYRIVLFDQRGCGRSTPHGELADNTTPHLIADMEALRDELDVASWLVFGGSWGSTLAL CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH AYAQAHPERCRGLVLRGIFLCRPQEIDWFLYGIRSFFPEAQRQLAEFIPEDERDDLLVAY HHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHH HRRLVDPDPAVHRPAAWQWATFEASCSTLLPSAELVAAFGSERTALSLSRIEAHYFVNGI HHHHCCCCCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHCCCCCEEHHHHHEEEEEEEEE FLPDDSLLANVARIRHIPALIVQGRYDAVCPITSADDLARAWPEAHYQVVPDAGHSAFEP ECCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCH GIARALVAACDRFAATGALI HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGPASLYPPITPYASGLLETDGVHRIYWETSGNPAGIPVLFVHGGPGAGTSANQRRFFD CCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC PARYRIVLFDQRGCGRSTPHGELADNTTPHLIADMEALRDELDVASWLVFGGSWGSTLAL CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH AYAQAHPERCRGLVLRGIFLCRPQEIDWFLYGIRSFFPEAQRQLAEFIPEDERDDLLVAY HHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHH HRRLVDPDPAVHRPAAWQWATFEASCSTLLPSAELVAAFGSERTALSLSRIEAHYFVNGI HHHHCCCCCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHCCCCCEEHHHHHEEEEEEEEE FLPDDSLLANVARIRHIPALIVQGRYDAVCPITSADDLARAWPEAHYQVVPDAGHSAFEP ECCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCH GIARALVAACDRFAATGALI HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9348090; 11011150; 10467172 [H]