Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316901

Identifier: 74316901

GI number: 74316901

Start: 932988

End: 933854

Strand: Direct

Name: 74316901

Synonym: Tbd_0883

Alternate gene names: NA

Gene position: 932988-933854 (Clockwise)

Preceding gene: 74316900

Following gene: 74316902

Centisome position: 32.06

GC content: 70.13

Gene sequence:

>867_bases
ATGACGTCGGGCTGGATGCTCGTCGCGGCGGCGCTGTTCGCGTTGATGGGCGTGCTGGTGAAGCACGCGTCGCAAAATTT
CTCGGCGCCCGAGCTCGTGTTCTACCGCTCGGCCTTCGGCCTGCTCGCGATCTGGGCGATGATCGCGGTCGGCCAACGCC
GGCTGCTCGCGCCCTTCGCGACAGTACACGCCGGAACGCACGTCTGGCGCGGGCTCTCCGGATTTCTCGCGCTGGTGCTG
TTTTTTTACGCGTTGAGCCGGCTGCCGCTCGCCACGGCCGTCACCCTCAACTACACCGCGCCGCTGTTTCTCGCGGCCCT
GTCGGCGTGGTGGCTGCGCGAACGCCACGGCCGCGGGGTGACCGGCGCGGTGCTGCTCGGCTTCGTCGGCGTCGTGTTGC
TGCTGCGCCCGCAGATGGACAACCAGGCCTGGCAGCCCGCGCTCGCCGGGCTTGCCTCCGGCATGCTCGCCGCGGTCGCC
TACGTCAACGTCAAACGCCTCGGCAAGCTCGGCGAGCCCGAGTGGCGCGTCGTGTTCTACTTCACGCTGCTGTCGACCGT
GGGCGGGGCGCTATGGATGGCGCTCGCCGGATTTCATTTCCCGCACCCGAGCGATTGGCCGTGGCTTGTCGGCATCGGCG
TCACGGCGACGCTTGCGCAACTCGCCCTGACCCGCGCCTACCACCGCGGGCACACGCTCACGGTCGGCGCGCTCGCCTAC
AGCACCGTCGGCTTTTCCGCTCTCTACGGCGTGGTACTGTTCGGCGAGCGTCTGCCGCCGCTGACCTGGGCCGGCATGGC
CGTCATCGCCGGCGCCGGCATCTGGGCCGTGCGCGCGTCGGCGCCGGCGCGACCCGAGTCGCTATAG

Upstream 100 bases:

>100_bases
CATGCCTTCCTGCGGCGCGAGATCGAACCTCACCTCGGATGAGCGCACGCACGAACCCGGACGGGCGGCCGTTGCCGCCC
GTTTTTTTCGTCCAGGCGAC

Downstream 100 bases:

>100_bases
TGGAAAGACTGTTGAGGAGACCGTCATGATCAGCCTGGATGTGGACCAAAACCTGATTGCCGTCACCGTGATGGGCCAGT
TCACGCTCGCCGACTATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVL
FFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVA
YVNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY
STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL

Sequences:

>Translated_288_residues
MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVL
FFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVA
YVNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY
STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL
>Mature_287_residues
TSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVLF
FYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAY
VNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAYS
TVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324991, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30912; Mature: 30781

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TVHAGTHVWRGLSGFLALVLFFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHCCCCC
TGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAYVNVKRLGKLGEPEWRVVFY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH
STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TVHAGTHVWRGLSGFLALVLFFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHCCCCC
TGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAYVNVKRLGKLGEPEWRVVFY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH
STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]