Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316895

Identifier: 74316895

GI number: 74316895

Start: 926905

End: 927552

Strand: Direct

Name: 74316895

Synonym: Tbd_0877

Alternate gene names: NA

Gene position: 926905-927552 (Clockwise)

Preceding gene: 74316884

Following gene: 74316900

Centisome position: 31.85

GC content: 68.36

Gene sequence:

>648_bases
ATGGTCTTCAAGCAGGGAATCCGGGCGTTCATCTTAACCGCCGGCGTGTTTGCGTGCACCGCGGTGTCAGCGACCAGCGT
GGCCGTGGTCGGCCTCTTCAGGGACAAGGCCATCGTCAGCATTGACGGCGGCAAGCCGCTCACGCTGAGCCGCGGCCAGA
CGGTAAGCGGCGTGACCTTGATCGCCGCCGACTCGGACCGCGTCGCGGTGGATGTCGACGGAGAGCGCCGCAGCCTTGGC
ATGGGACAGTCGTTTGCCGGGGGCGCTCAGACGGCCGCGCGCCAGTCGGTTTCGCTGACGGCCGATGCGCGCGGTCACTT
CGCGGCGAATGGCGCGCTGAACGGGTACCCGATCACGTTTCTGGTCGACACCGGCGCTACCGCGGTCGCGATCGGTGCGG
CGGAAGCCCGCCGGCTCGGGCTCGACTACCGCAGCGGCACGGCCGCGCGCGTCAACACGGCCGCGGGCGCCGTGCCGGCT
TGGCGGGTGACGTTCCACACGGTGAAGGTGGGCGGTATCAGCGTCAATCAGGTCGAGGGGCTGGTCGTCGAAAGCGGACT
CGACGTACCCCTGCTCGGCATGAGCTTTCTCAACCGGATGGACATGACGCGCGACGGCCAGACGATGACGCTGACGCGTC
GCTACTGA

Upstream 100 bases:

>100_bases
ACGGACCAGGTGCCAGGGAATGTCGTGGCGGTCGAGAAAGCTCGCGAAGTAGCCGGGCCCCTCGATCGGGGAGTGCTGAA
AAATCAGAACAGGATGCATG

Downstream 100 bases:

>100_bases
CGACGACCGCTGTAGCGGCCAGGTCGCAGGCGCCTATTTTTTGCGCTTGTCGTGCTCGATCAGCGCGTAGGCGCTGTGGT
TATGGATCGACTCGAAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVFKQGIRAFILTAGVFACTAVSATSVAVVGLFRDKAIVSIDGGKPLTLSRGQTVSGVTLIAADSDRVAVDVDGERRSLG
MGQSFAGGAQTAARQSVSLTADARGHFAANGALNGYPITFLVDTGATAVAIGAAEARRLGLDYRSGTAARVNTAAGAVPA
WRVTFHTVKVGGISVNQVEGLVVESGLDVPLLGMSFLNRMDMTRDGQTMTLTRRY

Sequences:

>Translated_215_residues
MVFKQGIRAFILTAGVFACTAVSATSVAVVGLFRDKAIVSIDGGKPLTLSRGQTVSGVTLIAADSDRVAVDVDGERRSLG
MGQSFAGGAQTAARQSVSLTADARGHFAANGALNGYPITFLVDTGATAVAIGAAEARRLGLDYRSGTAARVNTAAGAVPA
WRVTFHTVKVGGISVNQVEGLVVESGLDVPLLGMSFLNRMDMTRDGQTMTLTRRY
>Mature_215_residues
MVFKQGIRAFILTAGVFACTAVSATSVAVVGLFRDKAIVSIDGGKPLTLSRGQTVSGVTLIAADSDRVAVDVDGERRSLG
MGQSFAGGAQTAARQSVSLTADARGHFAANGALNGYPITFLVDTGATAVAIGAAEARRLGLDYRSGTAARVNTAAGAVPA
WRVTFHTVKVGGISVNQVEGLVVESGLDVPLLGMSFLNRMDMTRDGQTMTLTRRY

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22239; Mature: 22239

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKQGIRAFILTAGVFACTAVSATSVAVVGLFRDKAIVSIDGGKPLTLSRGQTVSGVTL
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCEEEEECCCEECCEEE
IAADSDRVAVDVDGERRSLGMGQSFAGGAQTAARQSVSLTADARGHFAANGALNGYPITF
EEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCEEECCCCCCCEEEE
LVDTGATAVAIGAAEARRLGLDYRSGTAARVNTAAGAVPAWRVTFHTVKVGGISVNQVEG
EEECCCEEEEEECHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCEEHHHCCE
LVVESGLDVPLLGMSFLNRMDMTRDGQTMTLTRRY
EEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MVFKQGIRAFILTAGVFACTAVSATSVAVVGLFRDKAIVSIDGGKPLTLSRGQTVSGVTL
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCEEEEECCCEECCEEE
IAADSDRVAVDVDGERRSLGMGQSFAGGAQTAARQSVSLTADARGHFAANGALNGYPITF
EEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCEEECCCCCCCEEEE
LVDTGATAVAIGAAEARRLGLDYRSGTAARVNTAAGAVPAWRVTFHTVKVGGISVNQVEG
EEECCCEEEEEECHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCEEHHHCCE
LVVESGLDVPLLGMSFLNRMDMTRDGQTMTLTRRY
EEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA