| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316880
Identifier: 74316880
GI number: 74316880
Start: 913440
End: 913691
Strand: Reverse
Name: 74316880
Synonym: Tbd_0862
Alternate gene names: NA
Gene position: 913691-913440 (Counterclockwise)
Preceding gene: 74316881
Following gene: 74316879
Centisome position: 31.4
GC content: 57.14
Gene sequence:
>252_bases ATGTCCGAACCCGTCGTCTACGATCGCAATCCTGCCGAACTCGAACTCGAGCCCGGCGAATACTGGTGGTGTTCCTGCGG GCGTTCGATGACCCAGCCGTTCTGCGACGGCTCGCACGAAGGTACAGGACTCGAGCCGGTTTCCTTCGTCATCAACGAAA AAACTACGGTCTGGCTCTGCAATTGCAAGCATACGAAGGACAAGCCGTTCTGCGACGGCACGCACGAGCAATTGCCCGAC GACATTTTCTGA
Upstream 100 bases:
>100_bases AAGGGACATTCTCCCCGTACGAAGCGAATTGGCCTACACCCGACGCGGATTTGCGCGCGACGGTCACGGCTAGAATGAGG TTTTTCGCCCTGGAGCCAGC
Downstream 100 bases:
>100_bases GCCCCGTGGGGTCGACTCCGGAAAGCGTGCTCGCGTTCTGGTTCGGCCCGCCGGGCAGCGCGGCCGAGACCGCGGCGCGC CAGCGCAAGCTGTGGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferredoxin-Dependent Glutamate Synthase; Zinc Finger CDGSH-Type Domain-Containing Protein; Glutamate Synthase; Iron Sulfur Domain-Containing CDGSH-Type; Glutamate Synthase Domain-Containing Protein; CDGSH-Type Iron Sulfur Domain-Containing Protein; Glutamate Synthetase; Glutamate Synthase Domain Protein; Zinc Finger CDGSH-Type; Cupin 2 Domain-Containing Protein; Glutamate Synthetas; Zinc Finger Cdgsh-Type Domain Protein; Conserved Region In Glutamate Synthase Family; Ferredoxin-Dependent Glutamate Synthase Peptide; Zn-Finger CDGSH Type; Iron Sulfur-Containing Domain Cdgsh-Type
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSEPVVYDRNPAELELEPGEYWWCSCGRSMTQPFCDGSHEGTGLEPVSFVINEKTTVWLCNCKHTKDKPFCDGTHEQLPD DIF
Sequences:
>Translated_83_residues MSEPVVYDRNPAELELEPGEYWWCSCGRSMTQPFCDGSHEGTGLEPVSFVINEKTTVWLCNCKHTKDKPFCDGTHEQLPD DIF >Mature_82_residues SEPVVYDRNPAELELEPGEYWWCSCGRSMTQPFCDGSHEGTGLEPVSFVINEKTTVWLCNCKHTKDKPFCDGTHEQLPDD IF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211057411, Length=78, Percent_Identity=50, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115534146, Length=82, Percent_Identity=43.9024390243902, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17556380, Length=78, Percent_Identity=48.7179487179487, Blast_Score=72, Evalue=4e-14, Organism=Drosophila melanogaster, GI28573970, Length=78, Percent_Identity=42.3076923076923, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9484; Mature: 9352
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVVYDRNPAELELEPGEYWWCSCGRSMTQPFCDGSHEGTGLEPVSFVINEKTTVWLC CCCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE NCKHTKDKPFCDGTHEQLPDDIF ECCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure SEPVVYDRNPAELELEPGEYWWCSCGRSMTQPFCDGSHEGTGLEPVSFVINEKTTVWLC CCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE NCKHTKDKPFCDGTHEQLPDDIF ECCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA