Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yibF [H]

Identifier: 74316864

GI number: 74316864

Start: 895751

End: 896359

Strand: Direct

Name: yibF [H]

Synonym: Tbd_0846

Alternate gene names: 74316864

Gene position: 895751-896359 (Clockwise)

Preceding gene: 74316863

Following gene: 74316865

Centisome position: 30.78

GC content: 63.71

Gene sequence:

>609_bases
ATGAAACTCATCACTTCGCTCACGAGCCCCTACGGCCGCAAGGTTCGCGTCGTCCTCGCCGAAAAGAAAATCCCCTGCCA
TCTCCAGGTCGAAAATCCCTGGAGCGCAGACAGCGTCGTGCGGGAATACAACCCGCTCGGCAAGGTGCCCGTCCTCGTGC
TCGAAGACGGCGTCAGCATGTTCGACTCGCGCGTCATCGTCGAATACCTCGACAACGCGAGCCCCGTCGCCCACCTGATC
CCGAGCGAGCAGAAGTCGCGCATGGTCGTGCGTGGCGTCGAGGCACTCGCCGACGGCGTGACCGAGGCCGCAGTCGCCCT
TTATCTCGAAAGAAAACGCGCACCCGAGCAACAGAGCGCCGACTGGATCGCCCTGCAGGAGAAGACCCTGGTCAGCGGAT
TCGACGCGCTCTCCGAGGCGCTCGGCGAAAAGCCCTGGTATCTCGGCAACGGCATGACGCTCGCCGACGTCGCCTGCGGC
TGCGCCCTCGGTTATCTCGACCTGCGCTTTCCCGAGCTTGACTGGCGCGCCGCCCACCCTAATCTGGAAAAGCTGTACGA
CAAGCTGATGACGCGCGCCTCGTTCAAGGATTCGGTGCCCGTCGCCTGA

Upstream 100 bases:

>100_bases
CGTCCCGGCCCTGCGCGCGCGGGTTGGAGCGCTGCTGGGCACAGGCGATAATGAGCCGGACCAATAATCGGCGCCGTCGG
AGCGCCTCCAGGGAAACTGC

Downstream 100 bases:

>100_bases
GTCGCATGGCCGCGCCGTTCGCGGACGGCGCGAATTCCACTTCGCGGGAGTCGATCATGGCGCATGAAATCGCAACGCTG
GCGGGCGGCTGCTTCTGGTG

Product: glutathione S-transferase

Products: HX; R-S-glutathione

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKLITSLTSPYGRKVRVVLAEKKIPCHLQVENPWSADSVVREYNPLGKVPVLVLEDGVSMFDSRVIVEYLDNASPVAHLI
PSEQKSRMVVRGVEALADGVTEAAVALYLERKRAPEQQSADWIALQEKTLVSGFDALSEALGEKPWYLGNGMTLADVACG
CALGYLDLRFPELDWRAAHPNLEKLYDKLMTRASFKDSVPVA

Sequences:

>Translated_202_residues
MKLITSLTSPYGRKVRVVLAEKKIPCHLQVENPWSADSVVREYNPLGKVPVLVLEDGVSMFDSRVIVEYLDNASPVAHLI
PSEQKSRMVVRGVEALADGVTEAAVALYLERKRAPEQQSADWIALQEKTLVSGFDALSEALGEKPWYLGNGMTLADVACG
CALGYLDLRFPELDWRAAHPNLEKLYDKLMTRASFKDSVPVA
>Mature_202_residues
MKLITSLTSPYGRKVRVVLAEKKIPCHLQVENPWSADSVVREYNPLGKVPVLVLEDGVSMFDSRVIVEYLDNASPVAHLI
PSEQKSRMVVRGVEALADGVTEAAVALYLERKRAPEQQSADWIALQEKTLVSGFDALSEALGEKPWYLGNGMTLADVACG
CALGYLDLRFPELDWRAAHPNLEKLYDKLMTRASFKDSVPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790018, Length=200, Percent_Identity=37.5, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: 2.5.1.18

Molecular weight: Translated: 22343; Mature: 22343

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITSLTSPYGRKVRVVLAEKKIPCHLQVENPWSADSVVREYNPLGKVPVLVLEDGVSM
CCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCHHH
FDSRVIVEYLDNASPVAHLIPSEQKSRMVVRGVEALADGVTEAAVALYLERKRAPEQQSA
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DWIALQEKTLVSGFDALSEALGEKPWYLGNGMTLADVACGCALGYLDLRFPELDWRAAHP
CEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
NLEKLYDKLMTRASFKDSVPVA
CHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLITSLTSPYGRKVRVVLAEKKIPCHLQVENPWSADSVVREYNPLGKVPVLVLEDGVSM
CCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCHHH
FDSRVIVEYLDNASPVAHLIPSEQKSRMVVRGVEALADGVTEAAVALYLERKRAPEQQSA
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DWIALQEKTLVSGFDALSEALGEKPWYLGNGMTLADVACGCALGYLDLRFPELDWRAAHP
CEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
NLEKLYDKLMTRASFKDSVPVA
CHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: RX; glutathione

Specific reaction: RX + glutathione = HX + R-S-glutathione

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]