| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316821
Identifier: 74316821
GI number: 74316821
Start: 844550
End: 845452
Strand: Reverse
Name: 74316821
Synonym: Tbd_0803
Alternate gene names: NA
Gene position: 845452-844550 (Counterclockwise)
Preceding gene: 74316822
Following gene: 74316819
Centisome position: 29.06
GC content: 66.22
Gene sequence:
>903_bases TTGATCACCCCCCGTATCCTCGCCACCGCGCTGCTCGCCGGATTCGGCGCACACGCAGAAGCCACTATCGACATCCAGTT CGATTACAGCTACGACAGCAGCGGTTTTCTCAGCGACGGCGACCGCCGGTCCGCGCTCGACGCCGCGGCGAACCTGTTCG AGCGTCGCTTTTCCGACCAGTTCACGGCAATCAACTCGACGGGGTCGAACAGTTTCGACACCGTCTTCTTCAACCCAGGC AATCCCTCTGGCGCCAACGTCGTGCACCACGACGCGTCGCTGGGGGAAAACGTGATCCGCGTCTACGCCGGCGGTTACCA CTACAACGACGACACGCTGGGCGAAGGCGGCCCGGGCGGCTACAGCTGCTCCGGCATCGGCAGCTTCTGCAGCGACGCGA CGCGGCGCGGCCAGGGGCCGGTCAACGGCGCAAGCGCAGTCGACGTCGCCCCGTGGGGTGGCTCGATCGTCTTCGATACC GACACCAACTGGCATTTCGGCACGACCACGAGCGGGCTCGGCGCGTCGGAATACGACTTCTACAGCGTCGCCGTCCACGA ACTCGCCCACGTACTCGGTTTCGCGACCTCGGATGCGTTCGACAACCGCATCGTCGGCAGCGATTTCGTCGGTCCGGCGG CAGGGACGGTCGTGCTCAACGAAAACCTCGACCATTGGGCGGAAGGCACGCTGACGACCTATCGCGGCGCGATCGAAGAA GCGGCAATGACCGGCACGCTCGCGAGCGGCACGCGCAAGCATTTCACCGAACTCGATTTCGCCGCCATGGAGGACATCGG CTGGCAGGTGACGCCGGTTCCCGAGGCGGGCACCTGGGCGATGATGCTGAGCGGCCTGGCCCTGGTCGGTGGCGTCGCGC GACGGCGCGCGCCTCGTCGCTGA
Upstream 100 bases:
>100_bases CTAGTCCCTGTCGCCGTCAGATTCGCCGCAGCAGCCGCGGCTGCGTGTTCGCACGCGCCATTGTCGACCCCCCCCCCGGA CCCAAGAATAGGAGCCAGCC
Downstream 100 bases:
>100_bases CCGGCCGAAGGTTGGCGGGCGCCCCGCCGTTTGCTGATTAAGCCAGCACCACGGTGAGATAGGTGATGTACAGCGCGCCG TTCACGAACAGGTGCCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MITPRILATALLAGFGAHAEATIDIQFDYSYDSSGFLSDGDRRSALDAAANLFERRFSDQFTAINSTGSNSFDTVFFNPG NPSGANVVHHDASLGENVIRVYAGGYHYNDDTLGEGGPGGYSCSGIGSFCSDATRRGQGPVNGASAVDVAPWGGSIVFDT DTNWHFGTTTSGLGASEYDFYSVAVHELAHVLGFATSDAFDNRIVGSDFVGPAAGTVVLNENLDHWAEGTLTTYRGAIEE AAMTGTLASGTRKHFTELDFAAMEDIGWQVTPVPEAGTWAMMLSGLALVGGVARRRAPRR
Sequences:
>Translated_300_residues MITPRILATALLAGFGAHAEATIDIQFDYSYDSSGFLSDGDRRSALDAAANLFERRFSDQFTAINSTGSNSFDTVFFNPG NPSGANVVHHDASLGENVIRVYAGGYHYNDDTLGEGGPGGYSCSGIGSFCSDATRRGQGPVNGASAVDVAPWGGSIVFDT DTNWHFGTTTSGLGASEYDFYSVAVHELAHVLGFATSDAFDNRIVGSDFVGPAAGTVVLNENLDHWAEGTLTTYRGAIEE AAMTGTLASGTRKHFTELDFAAMEDIGWQVTPVPEAGTWAMMLSGLALVGGVARRRAPRR >Mature_300_residues MITPRILATALLAGFGAHAEATIDIQFDYSYDSSGFLSDGDRRSALDAAANLFERRFSDQFTAINSTGSNSFDTVFFNPG NPSGANVVHHDASLGENVIRVYAGGYHYNDDTLGEGGPGGYSCSGIGSFCSDATRRGQGPVNGASAVDVAPWGGSIVFDT DTNWHFGTTTSGLGASEYDFYSVAVHELAHVLGFATSDAFDNRIVGSDFVGPAAGTVVLNENLDHWAEGTLTTYRGAIEE AAMTGTLASGTRKHFTELDFAAMEDIGWQVTPVPEAGTWAMMLSGLALVGGVARRRAPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31660; Mature: 31660
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITPRILATALLAGFGAHAEATIDIQFDYSYDSSGFLSDGDRRSALDAAANLFERRFSDQ CCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH FTAINSTGSNSFDTVFFNPGNPSGANVVHHDASLGENVIRVYAGGYHYNDDTLGEGGPGG HEEEECCCCCCCCEEEECCCCCCCCCEEECCHHHCCCEEEEEECCEEECCCCCCCCCCCC YSCSGIGSFCSDATRRGQGPVNGASAVDVAPWGGSIVFDTDTNWHFGTTTSGLGASEYDF CCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHH YSVAVHELAHVLGFATSDAFDNRIVGSDFVGPAAGTVVLNENLDHWAEGTLTTYRGAIEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHH AAMTGTLASGTRKHFTELDFAAMEDIGWQVTPVPEAGTWAMMLSGLALVGGVARRRAPRR HHHHCCHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MITPRILATALLAGFGAHAEATIDIQFDYSYDSSGFLSDGDRRSALDAAANLFERRFSDQ CCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH FTAINSTGSNSFDTVFFNPGNPSGANVVHHDASLGENVIRVYAGGYHYNDDTLGEGGPGG HEEEECCCCCCCCEEEECCCCCCCCCEEECCHHHCCCEEEEEECCEEECCCCCCCCCCCC YSCSGIGSFCSDATRRGQGPVNGASAVDVAPWGGSIVFDTDTNWHFGTTTSGLGASEYDF CCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHH YSVAVHELAHVLGFATSDAFDNRIVGSDFVGPAAGTVVLNENLDHWAEGTLTTYRGAIEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHH AAMTGTLASGTRKHFTELDFAAMEDIGWQVTPVPEAGTWAMMLSGLALVGGVARRRAPRR HHHHCCHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA