| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316822
Identifier: 74316822
GI number: 74316822
Start: 845549
End: 846757
Strand: Reverse
Name: 74316822
Synonym: Tbd_0804
Alternate gene names: NA
Gene position: 846757-845549 (Counterclockwise)
Preceding gene: 74316827
Following gene: 74316821
Centisome position: 29.1
GC content: 67.25
Gene sequence:
>1209_bases ATGGAAACTCCCCAAAACGCGCATTCTGAAGCAAAGGTCCCCGCGACGGAAGCCGTGATCCGCGTCGTGACGCGCATCGC GGCGCTGTCGGCCGAGGCGTGGAACACGCTCGCCGGCGACTCGCCTTTCGTGCAGCACGCCTTCCTCGACGCACTGGAAA CCAGCGGCTGCGTCGACGCATCGCTCGGCTGGGAACCCGTTCACCTCGCGCTCTTTCGCGATGGCCGGCTCGACGCCGCA ATGCCGCTCTACGTCAAGCATCACTCCTGGGGCGAGTTCGTCTTCGACTGGGCCTGGGCCGACGCCTATCGTCGCGAGGG CCTCGCCTACTATCCCAAGCTCGTCTGCTGCGTGCCCTTCTCCCCCGTCGCCGGCCCGCGCCTGCTGGCGCGCAGCGACG AGGATCGCGCCGCCCTGCTCACCGCGGCGCAGACGCTCACGCGCGACCTCGGCGCCTCGTCCTTCCATGTGCTGTTCCCG TCCGAGGCCGACCACGCGGCGCTCGCGGCGTCGCCGCTGCTGCATCGCACCGGCTTCCAGTTCCACTGGCATGCGTCCGC CGAGGGCGACGAGGCTCGCTACGCCAGCTTCGACGACTTCCTCGCCGCACTCACCCACGACAAGCGCAAGAAGATCCGCC AGGAAAGGAAGAAGCTCGCGAATCTCGGCATACGCTTCCGCTGGGTCGAAGGGCGGCAAAGCAGCGACGCCGACTGGGAC TTCTTCTACCGCTGCTACGCCGACACCTATGCCCGTCATCGCAGCGAGCCGCACCTCAACCGAGCGTTCTTCGCGACGCT GCGCGAGAAGGCACCGGAGTCGCTGCTCCTCATCATCGCCGAGCGCGACAACGTGCCGGTCGCCTGCTCGTTCTGCATGA AGGACGGCCGGCGGCTGTACGGCCGCCATTGGGGCGCGCTGGAATACGTGCCCGGCCTGCATTTCGAGACCTGCTACCAA CAGGGCATCGAATACGCGATCGCCCAGGGTCTGCAGGTATTCGAAGGTGGTGCCCAGGGCGAACACAAGCTCGCACGCGG CCTCACGCCGACGCCGACCCATTCCTGGCACTGGCTCGAGAACGCCGAATTCCGCAAGGCCGTCGACCGCTTCCTCGAGC GCGAGACCGACGCCATCGGGCACTACATCGACGAGTTGGACGGACCCTTCCGCCACCCGCCGCCACCGTCTACAGTGGGG AAGACCTAG
Upstream 100 bases:
>100_bases GCGGCGTCGGCGCTCGTCGCAGCGATGCCGCGCGGCGTGTTAAGGTTGCTCGACCGCAAGACTTGTTTGGCCTGGTATTC GTGCAGGTTCATCGCTGTTG
Downstream 100 bases:
>100_bases TCCCTGTCGCCGTCAGATTCGCCGCAGCAGCCGCGGCTGCGTGTTCGCACGCGCCATTGTCGACCCCCCCCCCGGACCCA AGAATAGGAGCCAGCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG KT
Sequences:
>Translated_402_residues METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG KT >Mature_402_residues METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG KT
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45360; Mature: 45360
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEC SLGWEPVHLALFRDGRLDAAMPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPF CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC SPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFPSEADHAALAASPLLHRTGFQ CCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE FHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD EEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHH FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHCCHHHH GRHWGALEYVPGLHFETCYQQGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLE HCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC NAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVGKT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEC SLGWEPVHLALFRDGRLDAAMPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPF CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC SPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFPSEADHAALAASPLLHRTGFQ CCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE FHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD EEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHH FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHCCHHHH GRHWGALEYVPGLHFETCYQQGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLE HCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC NAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVGKT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA