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The map label for this gene is tapC [H]

Identifier: 74316771

GI number: 74316771

Start: 797926

End: 799149

Strand: Direct

Name: tapC [H]

Synonym: Tbd_0753

Alternate gene names: 74316771

Gene position: 797926-799149 (Clockwise)

Preceding gene: 74316770

Following gene: 74316772

Centisome position: 27.42

GC content: 68.14

Gene sequence:

>1224_bases
ATGCGTTTCAGCTACACCGGCCGCACCCAGGGCGGCGAGAAGGCGCAGGGCATCCTCGAAGCAGAAAGCGCGACCGAATG
CGCGGCGAGCCTCCTGAAGAGCGGCATCGCGCCGATCACGATCCGCGAGACCGGGCGCTCGGAGCGCCGCGGCACCGGCA
GCGAAGCGTCGGGGCTCTTCGCGCCGCGGATCAAGCCGATCGACGTACAGCTTTTTTCGCGCCAGCTCTACACGTTGCTG
CGCGCCGGCGTGCCGATCCTGCGCGCGCTCGCCGGCCTGATCGAGTCGACTGCCAATCTCGCGTTCGCGCGCGTGATCGC
CTCGCTCAAGGAATCGCTCGAAGCCGGGCGCGACCTGTCGACCGCGATGCGCCAGCACCCGCGCGTGTTCTCGCCGTTCT
ACGTCGCGATGGTGCGCGTCGGCGAGGCGACGGGGCGCCTCGATGAAATCTTCCTGCGCATGTTCGAACACCTCGAATTC
GAGCGCGAGACGCGCGCCCGCATCAAGGAGGCGCTGCGCTACCCGACCTTCGTGCTCATCGCCATGGTCGTCGCCGTCGC
GGTCATCAACGTCTTCGTGATCCCGGCCTTCGCCAAGGTCTACGCCGGGTTTGGCGCCGAGTTGCCGCTCATGACCCGCA
TCCTGATCGAGACCTCGCGCCTGACGCTGGCCTACGGCTGGTATCTGCTCGCAGGCGCCGTGCTCGCCGGGGCAGGCTTC
AGCCTCTGGCGCGCCTCGCCCGACGGCCGTCTGGTCTGGGACCGCTTGAAATTGCGCCTGCCGCTGACCGGGTCGATCGT
GCTGCGCAGCACGCTCGGGCGCTTCGCGCGCACGCTCGCGCTGTCGATGAAGAGCGGCATTCCGGTGGCGCAGGCGCTCT
CGGTCGTCGCCGAAGTCACCGACAACGCCTGGATCGGCTCGCGCGTCGAGCAGATGCGCAACGGCATCGAGCGCGGCGAA
TCGATCCTGCGCACGGCCCAGCACGCCGGCGTGTTCAACGCCGTCGTGCTGCAGATGATCGCGGTCGGCGAGGAGACCGG
CAGCATCGACGAACTCATGCAGGAAGTCGCCGAGATGTACGAGCGCGAGGTCGACTACGAGATCAAGACCCTCTCGGCGC
GCATCGAGCCGATCATCATCGCCGCCATGGGCGGCCTCGTGCTCGTGCTCGCGCTCGGCGTCTTCCTGCCGATGTGGGAC
CTCGCGAGCGTCGCGATCAAGTGA

Upstream 100 bases:

>100_bases
CCGGCCGCACGCTGCGCGATCAGGCGCTCGCGCTCGCGCGCAGCGGCGTCGCCTCGCTGTCCGAGGCGATGCGGGTCAGC
GCGCAGGACGAGACGCACTG

Downstream 100 bases:

>100_bases
GTTTTTCGCCGTGATTTCGCGTTTTTCGTTCAAGTCCGGCGCACCAACGCCGAAATAGTTGCAGCGCTGCCGCGCTTGCG
GGCCGGCAGTGAACTCGTCC

Product: type II secretory pathway component PulF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRFSYTGRTQGGEKAQGILEAESATECAASLLKSGIAPITIRETGRSERRGTGSEASGLFAPRIKPIDVQLFSRQLYTLL
RAGVPILRALAGLIESTANLAFARVIASLKESLEAGRDLSTAMRQHPRVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEF
ERETRARIKEALRYPTFVLIAMVVAVAVINVFVIPAFAKVYAGFGAELPLMTRILIETSRLTLAYGWYLLAGAVLAGAGF
SLWRASPDGRLVWDRLKLRLPLTGSIVLRSTLGRFARTLALSMKSGIPVAQALSVVAEVTDNAWIGSRVEQMRNGIERGE
SILRTAQHAGVFNAVVLQMIAVGEETGSIDELMQEVAEMYEREVDYEIKTLSARIEPIIIAAMGGLVLVLALGVFLPMWD
LASVAIK

Sequences:

>Translated_407_residues
MRFSYTGRTQGGEKAQGILEAESATECAASLLKSGIAPITIRETGRSERRGTGSEASGLFAPRIKPIDVQLFSRQLYTLL
RAGVPILRALAGLIESTANLAFARVIASLKESLEAGRDLSTAMRQHPRVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEF
ERETRARIKEALRYPTFVLIAMVVAVAVINVFVIPAFAKVYAGFGAELPLMTRILIETSRLTLAYGWYLLAGAVLAGAGF
SLWRASPDGRLVWDRLKLRLPLTGSIVLRSTLGRFARTLALSMKSGIPVAQALSVVAEVTDNAWIGSRVEQMRNGIERGE
SILRTAQHAGVFNAVVLQMIAVGEETGSIDELMQEVAEMYEREVDYEIKTLSARIEPIIIAAMGGLVLVLALGVFLPMWD
LASVAIK
>Mature_407_residues
MRFSYTGRTQGGEKAQGILEAESATECAASLLKSGIAPITIRETGRSERRGTGSEASGLFAPRIKPIDVQLFSRQLYTLL
RAGVPILRALAGLIESTANLAFARVIASLKESLEAGRDLSTAMRQHPRVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEF
ERETRARIKEALRYPTFVLIAMVVAVAVINVFVIPAFAKVYAGFGAELPLMTRILIETSRLTLAYGWYLLAGAVLAGAGF
SLWRASPDGRLVWDRLKLRLPLTGSIVLRSTLGRFARTLALSMKSGIPVAQALSVVAEVTDNAWIGSRVEQMRNGIERGE
SILRTAQHAGVFNAVVLQMIAVGEETGSIDELMQEVAEMYEREVDYEIKTLSARIEPIIIAAMGGLVLVLALGVFLPMWD
LASVAIK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=407, Percent_Identity=27.027027027027, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1786295, Length=403, Percent_Identity=28.7841191066998, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44518; Mature: 44518

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSYTGRTQGGEKAQGILEAESATECAASLLKSGIAPITIRETGRSERRGTGSEASGLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
APRIKPIDVQLFSRQLYTLLRAGVPILRALAGLIESTANLAFARVIASLKESLEAGRDLS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TAMRQHPRVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEFERETRARIKEALRYPTFVLI
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AMVVAVAVINVFVIPAFAKVYAGFGAELPLMTRILIETSRLTLAYGWYLLAGAVLAGAGF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SLWRASPDGRLVWDRLKLRLPLTGSIVLRSTLGRFARTLALSMKSGIPVAQALSVVAEVT
HHHCCCCCCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DNAWIGSRVEQMRNGIERGESILRTAQHAGVFNAVVLQMIAVGEETGSIDELMQEVAEMY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EREVDYEIKTLSARIEPIIIAAMGGLVLVLALGVFLPMWDLASVAIK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFSYTGRTQGGEKAQGILEAESATECAASLLKSGIAPITIRETGRSERRGTGSEASGLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
APRIKPIDVQLFSRQLYTLLRAGVPILRALAGLIESTANLAFARVIASLKESLEAGRDLS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TAMRQHPRVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEFERETRARIKEALRYPTFVLI
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AMVVAVAVINVFVIPAFAKVYAGFGAELPLMTRILIETSRLTLAYGWYLLAGAVLAGAGF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SLWRASPDGRLVWDRLKLRLPLTGSIVLRSTLGRFARTLALSMKSGIPVAQALSVVAEVT
HHHCCCCCCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DNAWIGSRVEQMRNGIERGESILRTAQHAGVFNAVVLQMIAVGEETGSIDELMQEVAEMY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EREVDYEIKTLSARIEPIIIAAMGGLVLVLALGVFLPMWDLASVAIK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]