| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is gmhB [H]
Identifier: 74316759
GI number: 74316759
Start: 785498
End: 786079
Strand: Direct
Name: gmhB [H]
Synonym: Tbd_0741
Alternate gene names: 74316759
Gene position: 785498-786079 (Clockwise)
Preceding gene: 74316758
Following gene: 74316760
Centisome position: 26.99
GC content: 71.13
Gene sequence:
>582_bases ATGACCCGCGCCGTGTTTCTCGACAAGGACGGCACGCTCGTCGACGACGTGCCGTACAACGCCGACCCGACGAAGATCCG GCTCGCCGCGGGCGCCGGCCGCGCGCTCGCCGCGCTGCTCGCCGGCGGCTTTCGCCTGTTCGTCGTCTCCAACCAGCCGG GCGTCGGCCTCGGCTACTTCCCGCTCGCGGCCCTGCAGCCGCTGTCGCAGCGCATCCGACAGCTCGTGCGCGCGGACGGC GCCGATCTCCACGGCTTCTATTACTGTCCGCACGCGCCGGCGCGGGGGCAGCCCGCCTGCGGCTGCCGCAAGCCGGCGCC GGGCCTGGTGCTGCAGGCGGCCGCCGAGCATGGCATCGCGCTCGAGAATTCGTGGTTCATTGGCGACATCCTCGACGACG TCGAGGCCGGTCATCGCGCCGGCTGCCGCAGCATCCTCATCGACAACGGCAACGAAACCGAATGGCTGAGATCACCAATA CGCGAGCCCGACCACGTCGTGCGCAACCTGCACGACGCGGCGGCACACATTCTGAGCGCGGCGCAGCGCGAAACCGGGCG GGCGAGGGCCCTCGCGTCATGA
Upstream 100 bases:
>100_bases GATGGGACGCGCCGGCGGCAATCGTCACCCCGTTGCGTCCGCCGCGGGCGCTCCCGCCCGAAGCCGAATTGCCCGGCGTG CTCGGAGGCGCGCTCTTGCC
Downstream 100 bases:
>100_bases GCGGCAACTGGCACGACGCGCGGCGCATCCTCTGCGTGCGGCTCGACAACATGGGCGACGTGCTGATGACGACGCCGGCG ATCCGCGCCTTGAAGGCCGC
Product: histidinol-phosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTRAVFLDKDGTLVDDVPYNADPTKIRLAAGAGRALAALLAGGFRLFVVSNQPGVGLGYFPLAALQPLSQRIRQLVRADG ADLHGFYYCPHAPARGQPACGCRKPAPGLVLQAAAEHGIALENSWFIGDILDDVEAGHRAGCRSILIDNGNETEWLRSPI REPDHVVRNLHDAAAHILSAAQRETGRARALAS
Sequences:
>Translated_193_residues MTRAVFLDKDGTLVDDVPYNADPTKIRLAAGAGRALAALLAGGFRLFVVSNQPGVGLGYFPLAALQPLSQRIRQLVRADG ADLHGFYYCPHAPARGQPACGCRKPAPGLVLQAAAEHGIALENSWFIGDILDDVEAGHRAGCRSILIDNGNETEWLRSPI REPDHVVRNLHDAAAHILSAAQRETGRARALAS >Mature_192_residues TRAVFLDKDGTLVDDVPYNADPTKIRLAAGAGRALAALLAGGFRLFVVSNQPGVGLGYFPLAALQPLSQRIRQLVRADGA DLHGFYYCPHAPARGQPACGCRKPAPGLVLQAAAEHGIALENSWFIGDILDDVEAGHRAGCRSILIDNGNETEWLRSPIR EPDHVVRNLHDAAAHILSAAQRETGRARALAS
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=138, Percent_Identity=35.5072463768116, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082027, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 20618; Mature: 20486
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAVFLDKDGTLVDDVPYNADPTKIRLAAGAGRALAALLAGGFRLFVVSNQPGVGLGYF CCCEEEECCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCHH PLAALQPLSQRIRQLVRADGADLHGFYYCPHAPARGQPACGCRKPAPGLVLQAAAEHGIA HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHCCEE LENSWFIGDILDDVEAGHRAGCRSILIDNGNETEWLRSPIREPDHVVRNLHDAAAHILSA ECCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH AQRETGRARALAS HHHHCCCHHCCCC >Mature Secondary Structure TRAVFLDKDGTLVDDVPYNADPTKIRLAAGAGRALAALLAGGFRLFVVSNQPGVGLGYF CCEEEECCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCHH PLAALQPLSQRIRQLVRADGADLHGFYYCPHAPARGQPACGCRKPAPGLVLQAAAEHGIA HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHCCEE LENSWFIGDILDDVEAGHRAGCRSILIDNGNETEWLRSPIREPDHVVRNLHDAAAHILSA ECCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH AQRETGRARALAS HHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682; 12101286 [H]